Streptomyces cyaneochromogenes: EJ357_36645
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Entry
EJ357_36645 CDS
T06811
Name
(GenBank) rhamnogalacturonase B precursor
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
scya
Streptomyces cyaneochromogenes
Brite
KEGG Orthology (KO) [BR:
scya00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EJ357_36645
Enzymes [BR:
scya01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EJ357_36645
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
AZQ38304
UniProt:
A0A3S9MGJ3
LinkDB
All DBs
Position
complement(8094369..8096036)
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AA seq
555 aa
AA seq
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MSGSANRPVRRRTFVLGAAAAAGTAALSGTASAAAFGWSDDGSNYVVDTGANLVFKVSKT
NGDLTSLVYRGTEYQGYGGKNSHIESGLGTSTVSIRQSGSTILISVAYGTLRHYYAARSG
ENNIYLWTNRADTSVASTRFILRVKAGLFLNDEPDSYTYAPTAIEASDVFAKSDGQTRSK
HYSKLRVSDYDYVGWSAGGVGLWIVRSNHEKASGGPFYRSLLRHQSADGGGLYEILHYAQ
NQTENERFGLQGPYVIALTDGGAPSSSLFPGTLTTSWADSLGISGYVPASGRGRVAGVGI
TGRNTAYPYTVGLANSAAQYWGSARSSDGYFSVTGILPGTYTLTVFKSELAVYTTSVTVT
AGGTTTLNSIAIPSTNDPSGASAIWRINDWTGTPSGFKNADLMTYAHPSDVRAAAWTGNV
VIGSGSETSAFPCYLWKGVNSGLLVYFRLTAAQAAAAHTLRIGVTTAYANGRPQVVVNDT
WTSAIPSPPTQPSTRSLTNGSYRGNNHTFTYSVPASAWRTDTSQYNVLKINVVSGSGSTG
YLSAGTAIDAIDLLA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatccgcgaacagaccggtccgacgccgcaccttcgtgctcggcgccgcggcc
gcggcaggcacggccgccctgagcggcacggcctccgccgcggccttcggctggagcgac
gacggttcgaactacgtcgtcgacaccggcgccaacctcgtcttcaaggtcagcaagacc
aacggcgacctgacttcgctggtctaccgcggcacggagtaccagggctacggcggcaag
aactcgcacatcgagtccggcctcggcacatccaccgtgtccatcaggcagtcgggctcg
acgatcctgatctcggtcgcgtacggcacgctgcggcactactacgcggcccgcagcggc
gagaacaacatctacctgtggaccaaccgggccgacacctcggtcgcgtcgacccggttc
atcctgcgcgtcaaggcgggcctgttcctcaacgacgagcccgactcctacacctacgcg
cccaccgccatcgaggcctcggacgtgttcgcgaagtccgacggccagacccgctccaag
cactactcgaagctgcgggtcagcgactacgactacgtcggctggagtgccggcggcgtc
ggcctgtggatcgtccgctccaaccacgagaaggcctccggcggccccttctaccgctcg
ctgctgcggcatcagagcgcggacggcggcggtctgtacgagatcctgcactacgcgcag
aaccagaccgagaacgagcgcttcgggctccagggcccctacgtcatcgccctcacggac
ggcggcgccccgtcctcgtcgctgttcccggggacgctcaccacctcatgggcggactcg
ctcggcatctcgggctacgtcccggcgagcggccggggccgggtcgcgggcgtcgggatc
accgggcggaacacggcgtacccgtacaccgtggggctcgccaactcggcggcgcagtac
tggggttcggcccgctcctcggacggctacttctccgtcaccgggatcctgccggggacg
tacacgctcaccgtcttcaagagcgaactcgccgtgtacaccacctcggtgaccgtcacc
gcgggcggcacgacgaccctcaactcgatcgcgatcccctccacgaacgacccgtcgggc
gcgagcgcgatctggcggatcaacgactggacgggcacgccgagcggtttcaagaacgcc
gacctgatgacgtacgcccacccgtcggacgtccgggccgccgcctggaccggcaacgtg
gtgatcggcagcggcagcgagacctcggccttcccctgctacctctggaagggcgtcaac
agcggtctgctggtgtacttccggctgaccgccgcccaggccgccgccgcgcacaccctg
cgcatcggcgtgacgacggcctacgccaacggccggccgcaggtcgtcgtcaacgacacc
tggacgtcggcgatcccctccccgcccacccagccgagcacccggtccctgaccaacggg
tcctaccggggcaacaaccacacgttcacctacagcgtcccggcgagtgcctggcgcacg
gacaccagtcagtacaacgtgctgaagatcaacgtggtgagcggttcgggatcgaccggc
tatctcagcgcgggcacggcgatcgacgcgatcgacctgctcgcctga
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