Stenotrophomonas cyclobalanopsidis: AB1723_00515
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Entry
AB1723_00515 CDS
T10607
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
scyc Stenotrophomonas cyclobalanopsidis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scyc03032
]
AB1723_00515
03036 Chromosome and associated proteins [BR:
scyc03036
]
AB1723_00515
03400 DNA repair and recombination proteins [BR:
scyc03400
]
AB1723_00515
DNA replication proteins [BR:
scyc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AB1723_00515
Chromosome and associated proteins [BR:
scyc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AB1723_00515
DNA repair and recombination proteins [BR:
scyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AB1723_00515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
DUF6927
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
XCZ87686
LinkDB
All DBs
Position
104881..105153
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDAVAEAADLTKAESSRAVDAVVAAVTKALKDGDAVTLVGFGTFQVRDRAARTG
RNPKTGDTIKIAASKNPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaccgaattgatcgatgccgttgctgaagccgccgacctgaccaaggccgag
tccagccgcgctgtcgatgccgtcgttgctgccgtcaccaaggcgctgaaggacggcgat
gcggtcaccctggtcggcttcggtaccttccaggtccgcgaccgtgctgcccgcaccggc
cgcaacccgaagaccggcgacaccatcaagatcgctgcttcgaagaatccgtcgttcaag
gctggtaaggccctgaaggatgctgtaaactaa
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