Stenotrophomonas cyclobalanopsidis: AB1723_03135
Help
Entry
AB1723_03135 CDS
T10607
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AB1723_03135 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyc02000
]
AB1723_03135 (msbA)
Enzymes [BR:
scyc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
AB1723_03135 (msbA)
Transporters [BR:
scyc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AB1723_03135 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_30
AAA_16
AAA_22
DUF3584
nSTAND1
ABC_ATPase
AAA_21
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
XCZ88168
LinkDB
All DBs
Position
651146..652894
Genome browser
AA seq
582 aa
AA seq
DB search
MSSNHAPVWPIYKRLLGYTRAYWVFMVAAVIAMVVEALAGYHFTKLMEPLVNRGFVNPEP
RMAVILPLTILGLFLMRSLATWVSDYTLAKTGRSVVRDLREQILEKYLHLPSSHFDTEAT
PVMVSRLNFDTEQVTQASADALKTVVADTLTIIAMLVVMLQMSVKVTLAMLLVVPLIGAI
VSYVGKRYRRISRGIQDGMGTMAQTAEQSLAAQQEVKVHGTQQHEIGRYSRLANRMLALN
MKVEVTRAAASSVVQFLAALALAVIVWVSTREALAGKLNAGQFMGLMTSMMAIIPSLRRL
TSVQTSISRGVAAAERLFGIIDMPVERDAGRTPLRRARGELAFEHVMLRYRADSGIALED
ISFVARPGTVTAIVGRSGSGKTSLIRLVPRFYEPSGGLITLDGVALDDYPLADLRRQVAI
VGQKVMLFDDTIAANIAYGMDATDEQIRAAAEAANAWEFIARMPQQLQTPVGENGALLSG
GQRQRLAIARAILRDAPILILDEATAALDNESERLVQDALQRLMPERTTLVIAHRLSTIE
HADQVLVMDHGRIVERGTHKELLEMGGLYQHLHSMQFRERQD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaatcacgcgccggtgtggccgatctacaaacgcctgctcggctatacccgg
gcctactgggtgttcatggtggccgccgtcatcgcgatggtggtcgaggccctggccggc
taccacttcaccaagctgatggaaccgctggtcaaccgcggcttcgtcaaccccgagccg
cgcatggcggtgatcctgccgctgaccatcctcggcctgttcctgatgcgcagcctggcc
acctgggtcagcgactacacgctggccaagaccggccgcagcgtggtccgcgacctgcgt
gagcagatcctggaaaagtacctgcacctgccgtcctcgcatttcgataccgaagcgacg
ccggtgatggtcagccgcctgaacttcgataccgagcaggtcacccaggccagcgccgac
gcgctgaagaccgtggtggccgacacgctgaccatcatcgccatgctggtggtgatgctg
cagatgagcgtcaaggtgaccctggccatgctgctggtggtgccgctgatcggtgccatc
gtctcctacgtgggcaagcgctaccggcgcatcagccgcggcatccaggacggcatgggc
accatggcgcagaccgccgaacagtcgctggccgcgcagcaggaagtgaaggtgcacggc
acccagcagcatgagatcggccgctattcgcgcctggccaaccgcatgctggcgctgaac
atgaaggtcgaagtgacccgcgctgcggcgtcgagcgtggtccagttcctggccgcgctg
gcactggcggtcatcgtctgggtgtccacccgcgaagcgctggccggcaaactcaacgcc
ggccagttcatgggcctgatgacctcgatgatggccatcattccctcgctgcgccgcctg
accagcgtgcagacctcgatttcgcgcggcgtggccgccgcagagcgcctgttcggcatc
atcgacatgccggtcgagcgcgacgcagggcgtacgccgctgcggcgcgcccgtggcgaa
ctcgccttcgagcacgtcatgctgcgctaccgcgccgacagcggcatcgcgctggaggac
atcagcttcgtcgcccggcccggtaccgtcaccgccatcgtcggtcgttccggcagcggc
aagaccagcctgatccgcctggtgccgcgcttctacgaacccagcggtggcctcatcacc
ctcgatggcgtggccctggatgactatccgctggccgacctgcgccgccaggtggccatc
gtcgggcagaaggtcatgctgttcgacgacaccatcgccgccaacatcgcctatggcatg
gacgcgaccgatgaacagatccgtgccgcggccgaagcggccaacgcctgggagttcatc
gcgcgcatgccgcagcagctgcagaccccggtgggcgagaacggcgcgctgctgtccggc
ggccagcgccagcgcctggcgatcgcccgggcgatcctgcgcgacgcgccgatcctgatc
ctggacgaagccactgccgcgctggacaacgaatccgaacgcctggtgcaggacgcactg
cagcgcctgatgcccgagcgcaccaccctggtgatcgcgcaccgcctgtccaccatcgag
cacgccgatcaggtgctggtgatggaccatggccgcatcgtcgagcgtggcacccacaag
gaactgctggaaatgggtggcctgtaccagcacctgcacagcatgcagttccgcgaaagg
caggactga
DBGET
integrated database retrieval system
