Stenotrophomonas cyclobalanopsidis: AB1723_03390
Help
Entry
AB1723_03390 CDS
T10607
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc00541
Biosynthesis of various nucleotide sugars
scyc01100
Metabolic pathways
scyc01250
Biosynthesis of nucleotide sugars
Module
scyc_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AB1723_03390 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
scyc01005
]
AB1723_03390 (kdsA)
Enzymes [BR:
scyc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
AB1723_03390 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
scyc01005
]
Lipid A
AB1723_03390 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
XCZ88210
LinkDB
All DBs
Position
694278..695108
Genome browser
AA seq
276 aa
AA seq
DB search
MKLCGFEVGLDQPLFLIAGPCVIESMQLQLDTAGKLKEITDRLGVNFIFKSSFDKANRTS
GTAFRGPGMEEGLKVLAEVKKQIGVPVLTDVHEYTPMDEVASVVDVLQTPAFLVRQTDFI
RKVCAAGKPVNIKKGQFLAPWDMKPVVEKAKSTGNEQIMVCERGASFGYNNLVSDMRSLA
VMRDTGCPVVFDATHSVQLPGGQGTSSGGQREHVPVLARAAVAVGISGLFAETHPDPSKA
LSDGPNAWPLDQMEALLETLMELDAVTKKHGFSRFA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtgtggattcgaggttgggctggaccagcccctgttcctgatcgccggcccc
tgcgtgatcgagtcgatgcagctgcagctcgataccgccggcaagctgaaggagatcacc
gatcgcctcggcgtcaacttcatcttcaagtcgagcttcgacaaggccaaccgtacttcg
ggcaccgccttccgcggcccgggcatggaagaaggcctgaaggtgctggccgaagtgaag
aagcagatcggcgtgccggtgctgaccgacgtgcacgagtacaccccgatggacgaagtg
gcctcggtggtggacgtgctgcagaccccggcgttcctggtccgccagaccgatttcatc
cgcaaggtgtgcgcggccggcaagccggtcaacatcaagaagggccagttcctggcgccg
tgggacatgaagccggtcgtcgagaaggccaagtccaccggcaacgagcagatcatggtc
tgcgagcgtggcgccagcttcggctacaacaacctggtcagcgacatgcgttcgctggcg
gtgatgcgtgacaccggctgcccggtggtgttcgatgccacccattcggtgcagctgccg
ggcgggcagggcaccagttccggtggccagcgcgaacacgtgccggtgctggcacgcgcg
gcggtggcagtgggcatctccggcctgttcgccgagacccatcctgatccgtcgaaggca
ctgtccgatggccccaacgcgtggccgctggaccagatggaagctctgctggagaccctg
atggagctcgacgcggtgacgaagaagcacggtttctcgcgcttcgcgtga
DBGET
integrated database retrieval system
