Stenotrophomonas cyclobalanopsidis: AB1723_03460
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Entry
AB1723_03460 CDS
T10607
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyc03009
]
AB1723_03460 (rlmE)
Enzymes [BR:
scyc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
AB1723_03460 (rlmE)
Ribosome biogenesis [BR:
scyc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AB1723_03460 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
SUV3_C
Methyltransf_23
Methyltr_RsmB-F
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
XCZ88224
LinkDB
All DBs
Position
704715..705347
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AA seq
210 aa
AA seq
DB search
MATRSKSSQRWLKEHFSDPFVKKAQAEGMRSRAAYKLEELLERDRLLKPHMVVVDLGAAP
GGWSQQVRRQMGDTGRVLALDILDMPPLAGVEFLHGDFREETVLSQFEAMLGDQPVDLVL
SDMAPNKSGVGAVDQPRMMHLAELALDFADNHLKAGGAFLIKLFQGEGFDDYVREMRRRY
DKVSIRKPEASRKRSPEVYALGQGKRAHMK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggccacccgtagcaaaagcagccagcgctggctcaaggaacacttctccgaccccttc
gtgaagaaggcgcaggccgagggcatgcgctcgcgcgcggcctacaagctcgaggagctc
ctcgaacgtgaccgcctgctgaagccgcacatggtggtggtcgacctcggcgcagccccg
gggggctggtctcagcaggtccggagacagatgggtgacaccggccgcgtgctcgcgctg
gacatcctggacatgccgccgctggccggcgtggagttccttcacggtgacttcagggaa
gaaaccgtcctatcgcagtttgaagccatgctcggggatcagccggtagaccttgtgctg
tcggacatggcccccaataagagtggtgtgggtgcggtcgaccagccgcggatgatgcac
ctggccgagcttgcgctggacttcgccgacaaccacctaaaggccggtggggcgttcctg
atcaagctgttccaaggtgaaggctttgacgactacgtgcgtgagatgcgccgtcggtac
gacaaggtctccatccgcaagccggaagcatctcgcaagcgctcgcccgaggtgtatgcc
ttgggacagggaaaacgcgcccacatgaagtaa
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