Stenotrophomonas cyclobalanopsidis: AB1723_03950
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Entry
AB1723_03950 CDS
T10607
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scyc Stenotrophomonas cyclobalanopsidis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyc02000
]
AB1723_03950
Transporters [BR:
scyc02000
]
Other transporters
Pores ion channels [TC:
1
]
AB1723_03950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
SlipAM
Motif
Other DBs
NCBI-ProteinID:
XCZ88310
LinkDB
All DBs
Position
804365..806473
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AA seq
702 aa
AA seq
DB search
MLRYSRLTVAISLLVCAHAHAEQAPPEAQTLDKVIVTASRTGQDATTAPQTVVIIGKEQI
EQQLRLSSNSSDVLSSLLPSYTPSRGKMNGSGETLRGRTPLILVDGIPQSNPLRPTGREA
HTIDYALVERIEVIQGANAMNGLGATGGTINLITRRPEPGAVNQHVGVQTTLPTSEVRGE
TAGYRADYRISGSKGKWDYLLGAGYEDQGLWVDGEGTPIGVDVTQGDLMSTRAYDLHAKL
GYWIDDNQELQFSSNRYRIKSKAEYVPVAGNRDLGLPTTSVRGTPPGTPAWNDAWTTGLN
YTHHDLAGMELKAMVFNQEFEGLFGADNSSTFQDPLIAPVGMLYDQSRSTASKWGSKTSL
GRDDLLGGDLKITAGVDTLRDSGKQDLYGTGRTYVPDSRYSSVAGFVQADYKLLPQLTVQ
GGWRREEADLRIDSYTTLYRYNRVAVQGGTLKFQQNLRNIGLVYAPTERFNTFASYSEGF
GMPDVGRVLRSINTPGTKVESLRSLQPLLTRNSEIGVRYRSPSWEAEASAFQSRSEYGTR
VIAVDGAFQLAREKTAIEGLDASVRYRLNDGHRLGLSYAWTRGRYDSNADGRLDARLDGL
NIAPNRVIATWSAQWTPELSTFVQGQYAFSRNFDEAAKEFSGYALFDLGVDYRLAKGKVN
LGIANLFDRQYITYYSQSALIEPARYFAGRGRTVTLGYSLDF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgctgagatattcgcggctgacggtcgccatttcgttgctggtctgtgcccacgcccac
gccgagcaggccccgcccgaggcgcaaacgctcgacaaggtcatcgtgaccgcctcgcgt
accggccaggacgccaccaccgcgccgcagacagtggtgatcatcggcaaggaacagatc
gagcagcagctgcgactcagcagcaattcgtccgacgtgctgtccagcctgctgccgtcg
tacacgcccagccgcggcaagatgaacggcagtggcgaaaccctgcgcgggcgcacgccg
ctgattctggtcgatggcatcccgcagtcgaatccgctgcgcccaaccggccgcgaagca
cacaccatcgactacgcgctggtcgagcgcatcgaggtcatccagggcgccaacgccatg
aacggcctgggcgccaccggcggcaccatcaacctcatcacccggcgcccggagccgggt
gcggtcaaccagcacgtgggcgtgcagaccacgctgccgacgtccgaggtgcgcggcgaa
accgccggctaccgcgccgattaccgcatcagcggcagcaagggtaagtgggattacctg
ctcggcgccggttatgaagaccagggcctgtgggtggacggcgagggcacgccgatcggc
gtggacgtcacccagggcgacctgatgtcgacccgcgcgtacgacctgcacgcgaagctg
ggctactggatcgacgacaaccaggagctgcagttcagcagcaaccgctaccgcatcaag
tccaaggccgagtacgtgccggtggctggcaaccgcgaccttggccttcccaccacgtcg
gtgcgcggcacgccgccgggtacgccggcctggaacgatgcctggaccaccggcctcaac
tacacccaccacgacctggcgggcatggaactgaaggcgatggtgttcaatcaggagttc
gaaggcctgttcggcgccgacaattcgtccaccttccaggatccgctgatcgcaccggtc
gggatgctgtatgaccagtcgcgctcgaccgcctcgaagtggggctccaagaccagcctg
ggccgcgatgatctgctcggcggcgacctgaagatcactgcgggcgtggacacgctgcgc
gacagtggcaagcaggatctctacggcaccggccgcacctacgtgcccgattcgcgctat
agcagcgtggccggcttcgtgcaggccgattacaagctgctgccgcagctgaccgtgcag
ggtggctggcgccgcgaagaggccgacctgcgcatcgacagctataccacgttgtaccgt
tacaaccgcgtggcagtgcagggcggcacgctgaagttccagcagaacctgcgcaacatc
ggcctggtgtacgcgccgaccgagcgcttcaacaccttcgccagctattccgaggggttt
ggcatgcccgacgtcggccgcgtgctgcgctcgatcaacacgccgggcaccaaggtggaa
tcgctgcgttcgttgcaaccgctgctgacccgcaacagcgagatcggcgtgcgctaccgc
tcgccgtcgtgggaagccgaggccagtgcgttccagtcgcgctccgagtacggcacgcgc
gtcatcgcagtcgacggcgcgttccagctcgcccgcgaaaagaccgccatcgaaggcctg
gatgcgagcgtgcgttatcgtctgaatgatgggcaccgcctgggcctgtcctacgcctgg
acccgcgggcgttacgacagcaatgccgatggccggctcgacgcgcgcctggacggcctg
aacatcgcaccgaaccgcgtcatcgctacctggtcggcgcagtggacgccggagctgtcc
accttcgtgcaggggcagtacgccttcagccgcaacttcgacgaggccgccaaggaattc
agcggctatgcgctgttcgatctcggcgtggactaccggcttgccaagggcaaggtgaac
ctgggcatcgccaacctgttcgaccgtcagtacatcacctactactcgcagagcgcgctg
atcgaaccggcgcggtatttcgccgggcgtgggcggacggtgacactgggttacagcctg
gatttctga
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