Stenotrophomonas cyclobalanopsidis: AB1723_04335
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Entry
AB1723_04335 CDS
T10607
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
scyc Stenotrophomonas cyclobalanopsidis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scyc03032
]
AB1723_04335
03036 Chromosome and associated proteins [BR:
scyc03036
]
AB1723_04335
03400 DNA repair and recombination proteins [BR:
scyc03400
]
AB1723_04335
DNA replication proteins [BR:
scyc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AB1723_04335
Chromosome and associated proteins [BR:
scyc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AB1723_04335
DNA repair and recombination proteins [BR:
scyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AB1723_04335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
PTS-HPr
Motif
Other DBs
NCBI-ProteinID:
XCZ88379
LinkDB
All DBs
Position
894892..895197
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELIEILARRQAHLKADDVDLAVKSLLEMMGGSLSAGDRIEIRGFGSFSLHYRPPRV
GRNPKTGESVALPGKHVPHFKPGKELRERVSSVLPLDADPA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgaactgatcgaaatcctcgcgcgccgtcaggcgcacctgaaggccgat
gatgtcgatctggcggtgaagtcgttgctggaaatgatgggcggttccctttctgcgggg
gatcgcatcgaaatccgtggctttggcagcttctcgctgcactatcgcccgccgcgcgtg
ggccgcaatcccaagaccggcgaatcggtcgccctgccgggcaagcacgttccccatttc
aagccgggcaaagaactgcgtgagcgggtcagcagcgtgctgccgctggacgccgatccg
gcctga
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integrated database retrieval system
