Stenotrophomonas cyclobalanopsidis: AB1723_05040
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Entry
AB1723_05040 CDS
T10607
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc00061
Fatty acid biosynthesis
scyc00071
Fatty acid degradation
scyc01100
Metabolic pathways
scyc01212
Fatty acid metabolism
scyc02024
Quorum sensing
scyc04146
Peroxisome
Module
scyc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AB1723_05040
00071 Fatty acid degradation
AB1723_05040
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AB1723_05040
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB1723_05040
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scyc01004
]
AB1723_05040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scyc04147
]
AB1723_05040
Enzymes [BR:
scyc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AB1723_05040
Lipid biosynthesis proteins [BR:
scyc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AB1723_05040
Exosome [BR:
scyc04147
]
Exosomal proteins
Exosomal proteins of breast milk
AB1723_05040
Exosomal proteins of breast cancer cells
AB1723_05040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
Motif
Other DBs
NCBI-ProteinID:
XCZ88510
LinkDB
All DBs
Position
complement(1063864..1065540)
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AA seq
558 aa
AA seq
DB search
MSLDRPWLQSYPKGVPAEIDINEFHSVASVFDASVAKFRDRPAYSSFGKVLTYGETDALV
EQFAAYLLGELKLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTARELKHQLV
DAGVSALVVVDNFGDTVQQVIADTPVKHVITTGLGDLLGLKGMIVNFVLKYIKKMVPNYH
LKGAVRFRQALKLGSRHTLPKVEIDHDDVAFLQYTGGTTGVAKGAMLTNRNLIANMQQAS
AWIGASGIEPGKEWIITALPLYHIFALTANGLVFMKFGGCNHLITNPRDMKGFVKELKSV
RFTAITGVNTLFNGLLNTPGFDTVDFSSLKVTLGGGMAVQRAVAERWKKVTGVTLVEAYG
LTETSPAACINPLDLKEYNGAIGLPIPSTDACIKDDNGNTLAMGEVGELCIRGPQVMKGY
WQRPDETATAIDADQWLHTGDMAKMDEQGFFYIVDRKKDMILVSGFNVYPNEVEDVIAMM
PGVLEVAAVGVPDEKSGEVVKAVIVKKDPNLTAEMVKEHARANLTGYKHPRIVEFRKELP
KTNVGKILRRELRDTPAT
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggatcgtccctggctgcagagctatccgaaaggcgttcccgccgagatcgac
atcaacgagttccattcggtagcttcggtcttcgacgcttccgtcgccaaattccgcgac
cgtcccgcctactccagtttcggcaaggtccttacctacggcgaaaccgacgccctggtc
gagcagttcgccgcctacctgctgggtgagctcaagctcaagaagggtgaccgcgtcgcc
ctgatgatgcccaactgcctgcagtacccgatcgccaccttcggcgtgctgcgcgccggc
ctgaccgtggtcaacgtcaacccgctgtacaccgcgcgcgagctgaagcaccagctggtc
gatgccggcgtcagcgcgctggtggtggtcgacaacttcggcgacaccgtccagcaggtc
atcgccgacaccccggtcaagcacgtgatcaccaccggcctgggtgacctgctcggcctg
aagggcatgatcgtcaatttcgtgctcaagtacatcaagaagatggttcccaactaccat
ctgaagggcgcggtgcgcttccgccaggcgctcaagctcggcagccgccacaccctgccc
aaggtcgagatcgaccacgacgacgtcgccttcctgcagtacaccggcggcaccaccggc
gtagccaagggcgcgatgctgaccaaccgcaacctgatcgccaacatgcagcaggcctcg
gcctggatcggcgcatcgggcatcgagccgggcaaggagtggatcatcaccgccctgccg
ctgtaccacatcttcgcgttgaccgcgaacggcctggtcttcatgaaattcggtggctgc
aaccacctgatcaccaacccgcgtgacatgaagggcttcgtcaaggagctcaagtcggtg
cgcttcaccgccatcaccggcgtcaacaccctgttcaacggcctgctcaacacccccggc
ttcgacaccgtcgacttctcctcgctgaaggtgaccctgggcggcggcatggccgtgcag
cgtgcggtggccgagcgctggaagaaggtgaccggggtgaccctggtcgaggcctacggc
ctgaccgagacctcgccggcggcctgcatcaacccgctggacctgaaggaatacaacggc
gccatcggcctgccgatcccgtccaccgatgcctgcatcaaggacgacaacggcaacacg
ctggccatgggcgaagtgggcgagctctgcatccgcggcccgcaggtgatgaagggttac
tggcagcgccccgacgaaaccgccaccgccatcgatgccgaccagtggctgcacacgggc
gacatggcgaagatggacgagcagggtttcttctatatcgtcgaccgcaagaaggacatg
atcctggtgtccggcttcaacgtgtacccgaacgaagtcgaggacgtcatcgcgatgatg
ccgggcgtgctggaagtggctgctgtcggcgtaccggacgagaagtccggtgaggtggtg
aaggcggtcatcgtgaagaaggacccgaacctgaccgccgaaatggtcaaggaacatgcg
cgggccaacctcaccggctacaagcaccccagaatcgtagaattccgaaaagagctgccg
aagaccaacgtaggcaaaatcctccgtcgcgagctccgcgatacgcccgccacgtaa
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