Stenotrophomonas cyclobalanopsidis: AB1723_07295
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Entry
AB1723_07295 CDS
T10607
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
scyc Stenotrophomonas cyclobalanopsidis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyc02000
]
AB1723_07295
Transporters [BR:
scyc02000
]
Other transporters
Pores ion channels [TC:
1
]
AB1723_07295
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF748
Motif
Other DBs
NCBI-ProteinID:
XCZ88924
LinkDB
All DBs
Position
complement(1539190..1540428)
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AA seq
412 aa
AA seq
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MSMPFKAQGTGGLSLSIALAVLAGCSPDRNGDTGQSPNAGPASGSRMAEPTAASAEAAGV
ESASEVPEFPIIPAIVVPQVLGVTPAQQALEASLQSVLDPMEGITVSPARCDTGGSLINS
AGITRMDEQGTLTRNSEEGLFKINADGSGTANFEGGLIEVNADGSGTINGPAAGDGGDSA
IIRVQADGSGTYNGPAGLIQLDGQGGGTWNGDKGLITNTGDGGGTWNGPLGLIRVNPDGS
GTWNGDAGLIVNNGDGTGTIGPPARPVKMPPMPRLPPAGKFPPLKKFAPPGAPCGYLITL
NDRVLFDFDKATIRADASQLLDTLASALARVKASRMEVRGHTDSKGEDVYNQQLSERRAQ
AVQAALRERGATQQMDARGFGEREPVAPNELEGKDNPSGRQLNRRVEIFVRT
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgccatttaaagcccagggaactggcgggttgtcgttgtcgatcgcactcgcc
gtgctcgccggctgctcgccggatcgaaatggtgacacaggacaatcccccaatgccggc
cccgcttcgggaagccgcatggccgagccaaccgctgcctcggcagaggccgcgggcgtg
gagtccgccagtgaggtgccggaatttccgatcatcccggccatcgtggtgccgcaggtc
cttggcgtgacgcctgcgcagcaggcgctggaagcttcattgcagtcggtcctcgacccc
atggaaggcatcacggtctccccggcgcgctgcgacactggcggcagtctgatcaacagt
gccggcatcacgcgcatggatgagcagggaacactcacgcgcaacagtgaggaaggcctg
ttcaagatcaatgcggatggcagcggcactgccaacttcgagggtggcctgatcgaggtc
aatgcggatggcagtggcacgatcaatggccctgccgctggtgatggcggggacagtgca
atcatccgcgtgcaggccgatggcagcggcacctacaacggcccggcgggcctgatccag
ctcgacggccagggcggtggcacctggaatggtgacaagggcctgatcaccaataccggc
gacggtggcggtacgtggaacggacccctgggcctgatccgcgtcaaccctgacggatcc
ggaacctggaatggcgatgcaggcctgatcgtcaacaacggcgacggtactggtaccatc
ggtccgccggcgcgcccggtaaaaatgccgcccatgccgcgactcccgcccgctggaaaa
ttcccgccgctgaaaaagtttgcgccccccggtgctccttgcggctacctgatcacgttg
aatgatcgggtcctcttcgattttgacaaggctacgatccgcgcggatgcgtcacagctg
ctggatacgctggcctccgcgctggcgcgggtgaaagcctctcgcatggaggttaggggg
catactgattccaaaggcgaagatgtctacaaccagcagctatcggagcgtcgtgcccaa
gcggtgcaggctgcactgcgcgaacggggggcgacacagcagatggacgctcgcgggttc
ggcgagcgcgagccggttgcccccaacgaactggagggcaaagacaaccccagcggccgc
cagctcaatcggcgcgttgagattttcgtccgcacctga
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