Stenotrophomonas cyclobalanopsidis: AB1723_08095
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Entry
AB1723_08095 CDS
T10607
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyc03009
]
AB1723_08095
Enzymes [BR:
scyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AB1723_08095
Ribosome biogenesis [BR:
scyc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AB1723_08095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
XCZ89079
LinkDB
All DBs
Position
1725468..1727120
Genome browser
AA seq
550 aa
AA seq
DB search
MSDTPRNKLSLKREATSEQFKLEERLHKVLAQAGLGSRRALEQRIAEGLVKVNGEVAQTG
MSVKSGDKIELDGRGFVATALAEPSRVLVYNKPEGEVTTREDPEGRPTVFESLPPLKGAR
WIAIGRLDINTTGLLLATTDGELANAMMHPSFEVEREYVVRVRAPEGEEKVSDAIVDRLA
RGVALEDGPAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRTRYGK
VSLPRELVRGHSVELPTAQVEALRAQLKLEEGAPSALTLQPVIGQRRAAKTTVRVREGGR
GNAYVNGHSTADEGRELRRFDNVREDRGRGRGGKGGGFKGGLTVSGEAAAKQSQKPFKQR
APRNDRSLPEGNPAAFRTWYVPDGVSTGPSGHRNAGPGARGPGARGPGAGAGGQGRPYGK
PKGPGAGAGGGQGRGGFGGEGRGGAGGGQGRPAGAGNRSQGQGNKHPYGHPGNAPSFPSD
HANPGFSPYGSTRPAGNGRPGGNRGPGGNRGPGGPGGNRGPGGPGGNRGPGGPGGNRGPG
GPRRSGPRGG
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgtaacaagctctcgctgaagcgcgaagccacctccgaacagttc
aagctggaagagcgcctgcacaaggtgctggcccaggccggcctcggctcgcgccgcgcg
ctggaacagcgcatcgccgaaggcctggtcaaggtcaacggcgaagtcgcgcagaccggc
atgtcggtcaagagcggcgacaagatcgagctggatggccgtggcttcgtcgccaccgcc
ctggccgagccgtcgcgcgtgctggtctacaacaagccggaaggcgaagtgaccacccgc
gaagatcccgaaggccgcccgaccgtgttcgaatccctgccgccgctgaagggcgcgcgc
tggatcgccatcggccgcctggacatcaacaccaccggcctgctgctggccaccaccgac
ggtgaactggccaacgccatgatgcacccgtcgttcgaggtcgagcgcgagtacgtggtg
cgcgtgcgcgccccggaaggcgaggaaaaggtctccgacgccattgtcgaccgcctcgcc
cgtggcgtggcgctggaagacggcccggccaagttcgacgagatcgaacgcatcggcggc
accgactcgcacgactggttccgcgtcgtggtgaaggaaggccgcaaccgcgaagtgcgc
cgcctgtgggaatcgcagggctgccaggtcagccgcctgaagcgcacccgctacggcaag
gtcagcctgccgcgcgaactcgtgcgtggccattcggtcgaactgcccaccgcccaggtc
gaagccctgcgcgcgcagctgaagctggaagagggcgcgccgtcggcactgaccctgcag
ccggtgatcggccagcgtcgcgccgccaagaccaccgtgcgcgtgcgcgaaggcggtcgt
ggcaatgcctacgtcaacggccacagcaccgccgatgaagggcgcgaactgcgtcgcttc
gacaacgtgcgcgaagaccgcggccgtggtcgcggtggcaagggtggcggcttcaagggc
ggcctgaccgtcagcggcgaagcagccgccaagcagtcgcagaagccgttcaagcagcgc
gcgccgaggaatgaccgttcgctgccggaaggcaacccggccgcgttccgtacctggtac
gtgccggacggtgtcagcaccggcccgagcggtcaccgcaacgccggtccgggcgcacgt
ggcccgggtgcccgtggtccgggcgcaggcgcgggcggccagggccgtccgtacggcaag
ccgaagggtccgggcgccggtgcaggtggcggccagggtcgcggcggcttcggcggtgaa
ggccgtggtggcgccggtggcggccagggtcgtccggccggtgcgggcaaccgctcgcag
ggccagggcaacaagcacccgtacggccatccgggcaacgccccgagcttcccgtccgac
cacgccaatccgggcttcagcccgtacggcagcacgcgtccggccggtaacggtcgtccg
ggcggcaatcgcggtccgggcggcaaccgtggcccgggtggtcccggtggcaaccgtggt
cccggcggcccgggtggcaaccgtggcccgggtggccccggcggcaaccgcggtccgggt
ggcccgcgtcgcagcggcccgcgcggcggctga
DBGET
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