Stenotrophomonas cyclobalanopsidis: AB1723_08660
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Entry
AB1723_08660 CDS
T10607
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AB1723_08660 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scyc01007
]
AB1723_08660 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyc03016
]
AB1723_08660 (thrS)
Enzymes [BR:
scyc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
AB1723_08660 (thrS)
Amino acid related enzymes [BR:
scyc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
AB1723_08660 (thrS)
Transfer RNA biogenesis [BR:
scyc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AB1723_08660 (thrS)
Prokaryotic type
AB1723_08660 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-ProteinID:
XCZ89177
LinkDB
All DBs
Position
complement(1830615..1832516)
Genome browser
AA seq
633 aa
AA seq
DB search
MINITLPDGSRREFEHPVSVMDVAQSIGAGLAKATIAGAVDGVLVDASDVIDHDASLRII
TAKDEEGVEIIRHSCAHLVGHAVKQLYPDVKMVIGPVIAEGFYYDIYSERPFTPEDMAAI
EKRMGELIAQDYDVIKKVTPRAEVVEIFKARGEDYKLRLIEDMSDDIQAMGMYYHQEYVD
MCRGPHVPNTRFLKAFKLTRISGAYWRGDAQNEQLQRIYGTAWADKKQLEAYIKRIEEAE
MRDHRRIGKQQDLFHLQEEAPGLVFWHPKGWALWQVVEQYMRKVYRSSGYGEVRCPQILD
VSLWKKSGHWDNYQDNMFFTESEKRTYAVKPMNCPGHVQVFNQGLHSYRDLPIRYGEFGS
CHRNEPSGALHGILRVRGFTQDDGHVFCTENQIESEVTAFHQQALAVYQHFGFDEIQIKI
ALRPESRLGDDATWDKAEGALRSALTACGVEWQELPGEGAFYGPKIEYHLKDAIGRTWQL
GTMQVDFMMPGRLGAEYVDENSQKKHPVMLHRAIVGSMERFLGILIEHHAGQFPAWLAPT
QVVVANITDAQAEYVAGVTKTLAEQGFRVSSDLRNEKIGYKIREHTLQRVPYLLVIGDRE
KENGAVAVRTRSGEDVGSMSLQAFIERLHAEGA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatatcacccttcccgacggcagccgccgcgaattcgaacatcccgtcagcgtc
atggacgtcgcccagtcgatcggcgccggcctggccaaggccaccatcgccggcgccgtt
gatggcgtgctggtcgatgccagcgacgtcatcgaccacgatgccagcctgcgcatcatc
accgccaaggacgaggagggcgtggagatcatccgccactcctgcgcccatctggtcggc
cacgccgtcaagcagctgtatccggacgtgaagatggtgatcggcccggtcatcgccgag
ggcttctactacgacatctattccgagcgcccgttcacgccggaagacatggccgccatc
gaaaagcgcatgggcgagctgatcgcccaggattacgacgtcatcaagaaggtgacgccg
cgcgctgaagtggtcgagatcttcaaggcccgtggcgaggactacaagctgcgcctgatc
gaggacatgtccgacgacatccaggcgatgggcatgtactaccaccaggaatacgtggac
atgtgccgcggcccgcacgtgccgaacacgcgcttcctgaaggccttcaagctgacccgc
atctccggcgcctactggcgaggcgatgcgcagaacgaacagctgcagcgcatctacggc
accgcttgggccgacaagaagcagctcgaggcgtacatcaagcgcatcgaggaagccgag
atgcgcgaccaccgccgtatcggcaagcagcaggacctgttccacctgcaggaagaggcc
ccgggcctggtgttttggcatcccaagggctgggcgctgtggcaggtggtcgagcagtac
atgcgcaaggtctaccgcagcagcggctacggcgaagtgcgctgcccgcagatcctggac
gtgagcctgtggaagaagtccggccactgggacaactaccaggacaacatgttcttcacc
gaatcggagaagcgcacctacgcggtcaagccgatgaactgcccggggcatgtgcaggtg
ttcaaccagggcctgcacagctaccgcgacctgccgatccgctacggtgagttcggttcc
tgccaccgcaacgagccgtccggcgcgctgcacggcatcctgcgcgtgcgtggtttcacc
caggacgacggccatgtgttctgcaccgagaaccagatcgaatcggaagtgaccgcgttc
caccagcaggcgctggcggtctaccagcacttcggtttcgacgagatccagatcaagatc
gccctgcgcccggaatcgcgcctgggtgatgacgccacctgggacaaggccgaaggcgcg
ctgcgctcggcgctgaccgcctgtggcgtggaatggcaggagctgccgggcgagggcgcc
ttctacggcccgaagatcgagtaccacctgaaggacgcgatcggccgtacctggcagctg
ggcaccatgcaggtcgacttcatgatgccgggccgcctgggcgccgagtacgtggacgaa
aacagccagaagaagcacccggtcatgctgcaccgggccattgtcggctcgatggagcgt
ttcctgggcatcctgatcgagcaccacgccggccagttcccggcctggctggcgccgacc
caggtggtggtggccaacatcaccgacgcccaggctgaatacgtcgcaggcgtgaccaaa
acccttgcggagcaaggcttccgcgtcagctccgatttgcgtaacgagaagatcggttat
aaaatccgcgagcatacgttgcagcgcgtgccttacctgctggtcatcggtgaccgcgag
aaggaaaatggagctgtagcggtgcgtacgcgttctggcgaagacgttggcagcatgagc
ctgcaggccttcatcgagcggctccacgccgagggcgcgtaa
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