Stenotrophomonas cyclobalanopsidis: AB1723_08695
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Entry
AB1723_08695 CDS
T10607
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyc03016
]
AB1723_08695 (truB)
Enzymes [BR:
scyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AB1723_08695 (truB)
Transfer RNA biogenesis [BR:
scyc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB1723_08695 (truB)
Prokaryotic type
AB1723_08695 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
XCZ89184
LinkDB
All DBs
Position
complement(1839457..1840365)
Genome browser
AA seq
302 aa
AA seq
DB search
MTRIQFRRLDGILLLDKSTGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEIQLGQTTDTDDSEGQVLLQRPVPAISAEALQAALAPLTGSILQ
RAPIYSALKQGGEPLYVKARRGDVIEAPEREVQVHAIEVLEQQADRLRLRVTCGSGTYIR
SLARDLGEALGCGAHISALRRLWVEPFHAPAMVTLDQLRAMVEAGDEAGMDALLLPLAAG
LAEYPRVDLDAEQAHRFCVGQRQRDATWPRGLVAVYGPDDAVQGLGQVDHSGLLAPQRRF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattcagttccgccgcctggatggcatcctgctgctcgacaagtcgaccggc
atgagctccaacgccgccctgcaggtggcccgccgtctgttccgtgccgaaaagggcggc
cataccggcagcctcgacccgctggccaccggcctgctgccgctgtgcttcggcgaggcg
accaagatcgccggcctgctgctgggctcggccaaggcctatgacgccgagatccagctc
ggccagaccaccgataccgatgattccgaaggccaggtgctgctgcagcgcccggtcccg
gcgatcagcgccgaggccctgcaggccgcactggcgccgctgaccggcagcatcctgcag
cgcgccccgatctattcggcgctgaagcagggcggcgagccgctatacgtgaaggctcgc
cgcggcgacgtcatcgaggcgcccgagcgcgaggtgcaggtgcatgccatcgaggtgctc
gagcagcaggccgaccgcctgcggctgcgggtgacctgcggatcgggcacctacatccgc
agcctggcccgtgacctcggcgaggcgctgggctgcggcgcgcatatcagcgcactgcgc
cggctgtgggtcgagccgttccacgccccggccatggtcaccctggaccagctgcgggcg
atggtcgaggccggcgacgaggcgggcatggacgcgctgctgctgccactggccgccggc
ctggccgaatatcctcgggtcgacctcgacgctgaacaggcgcaccgcttctgtgtcggc
cagcgccagcgcgacgccacctggccgcgcggcctggtggccgtgtatgggccggacgat
gctgtccaagggctggggcaggttgaccacagtggcctgctggccccgcagcgtcgtttc
aacctctga
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