Stenotrophomonas cyclobalanopsidis: AB1723_08875
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Entry
AB1723_08875 CDS
T10607
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyc03016
]
AB1723_08875 (truA)
Enzymes [BR:
scyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AB1723_08875 (truA)
Transfer RNA biogenesis [BR:
scyc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB1723_08875 (truA)
Prokaryotic type
AB1723_08875 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
AtzH-like
Motif
Other DBs
NCBI-ProteinID:
XCZ89216
LinkDB
All DBs
Position
complement(1876961..1877731)
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AA seq
256 aa
AA seq
DB search
MRYALGVEYDGSDFRGWQNLGEGGPSVQASLEQALSSVADAPLQVVCAGRTDAGVHGQCQ
VVHFDTDVVRDPRAWMLGTTTRLPRSIAVRWCVPVADDFHARFSARARRYRYRLLNREVR
PALDRQTLSWERRALDETLMHAAGQALLGENDFSAFRSVQCQALHARRELQSLQVSRQGE
VIEVAVRGNAFLHHMVRNIVGSLIMVGSGEKPVEWIAELLAGRDRTVAGPTAPPQGLVFL
GPLYPDNWQLPAEVTL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacgcgctcggcgtcgaatacgacggcagcgatttcaggggctggcagaacctg
ggcgagggcggacccagcgtccaggccagcctggagcaggccctgtcttcggtggccgac
gcgccgctgcaggtggtctgtgccggccgcaccgatgcgggcgtgcacggccagtgccag
gtcgtgcatttcgataccgacgtggtgcgcgacccgcgcgcctggatgctgggcaccacc
acccgcctgccgcgctcgatcgcggtgcgctggtgcgtgccggtggccgatgatttccac
gcccgcttctcggcgcgtgcgcgccgctaccgctaccgcctgctcaaccgcgaggtgcgc
ccggcgctggaccggcagaccctgagctgggaacggcgggcgctggacgagaccctcatg
cacgccgccggccaggcgctgctcggcgagaacgacttcagtgcgttccgctcggtgcag
tgtcaggcgctgcatgcgcggcgtgaactgcagtccctgcaggtcagccgccagggcgaa
gtgatcgaggtggcggtgcgtggcaatgcattccttcatcacatggtccgcaatatcgtc
ggttcgctgatcatggtcggcagcggcgagaaaccggtggagtggatcgccgagctgctg
gccggccgtgatcgcaccgttgccggccctaccgcacctccgcaggggctggtgttcctg
gggccgctgtaccctgacaactggcaactgcctgccgaggtcaccttatga
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