Stenotrophomonas cyclobalanopsidis: AB1723_09920
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Entry
AB1723_09920 CDS
T10607
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
scyc Stenotrophomonas cyclobalanopsidis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyc03000
]
AB1723_09920 (prpR)
Transcription factors [BR:
scyc03000
]
Prokaryotic type
Helix-turn-helix
Other families
AB1723_09920 (prpR)
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GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_5
AAA_16
HTH_8
Mg_chelatase
HTH_23
HTH_Tnp_1_2
Hydrolase
HTH_17
HTH_11
AAA_2
HTH_Tnp_ISL3
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
XCZ89410
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Position
2112950..2114533
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AA seq
527 aa
AA seq
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MYLPRSPLRHADADPGRPVIWTVSVSRLTGLLGDVIPEFDRRARIEQINLGFEEAVDVIG
QRLRREHCDVVIAGGSNAAWLRGRLELPLVPIQANGFDLMEALARARRIAARIGLVTHAS
DVPVFSNFQHSFGLDIEHRRFVTREDARDCIADLRANGIEVIVGTGMAIDHAEQMGLPGV
LLYSADSVRQAFEHALELTQALARSGGSRSVSRRRTAPRSDAHALLGDSEAMAQVRAQIA
LYAPHDSTVLVTGETGTGKERVARQLHAASGRRGRFVALNCGAISESLLEAELFGYSDGA
FTGARRGGRVGLVEAADGGTLFLDEIGELPLPLQTRLLRVLEEREVLRVGATEPTPVDLR
VVAATLQSLEQRAATGSFRRDLYYRLAALRIALPSLRARRGDIPVLAQHFFRQLRGIDAP
LDDAAMAVLTAAEWPGNVRELRNLVDRLRIHWQPAEGPIDAARLLQLAPELTSEGATALP
LESNGKRPPRAQLETLLQEHRNDREGMAQALGVSRTTLWRWLRAEGL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgccccgctctcccctgcgccacgctgatgccgacccaggccgcccggtcatc
tggacggtcagcgtctcgcgcctgaccggcctgctcggcgatgtcatccccgagttcgac
cgccgcgcgcgcatcgagcagatcaacctgggtttcgaggaagcggtggatgtgatcggc
cagcgcctgcgccgcgagcactgcgacgtggtcatcgccggcggctccaatgcggcctgg
ctgcgcgggcggctggagctgccgctggtgccgatccaggccaacggcttcgatctgatg
gaggcgctggcccgtgcccgccgcatcgccgcgcgcatcggcctggtcacccacgccagc
gacgtaccggtcttcagcaatttccagcacagcttcggccttgatatcgagcatcgccgc
ttcgtcacccgcgaggatgcgcgcgactgcatcgccgacctgcgcgccaacggcatcgag
gtgatcgtcggcaccggcatggccatcgaccacgccgaacagatgggcctgccgggcgtg
ctgctgtactcggccgattcggtacggcaggcgttcgaacacgcgctggaactgacccag
gcgctggcccgctccggcggcagccgctcggtctcacgccgccgcaccgccccgcgcagc
gatgcgcacgccctgctcggcgacagcgaggcgatggcccaggtgcgcgcacagatcgcg
ctgtatgccccgcatgacagcaccgtgctggtcaccggcgagaccggcaccggcaaggaa
cgggttgcgcgccagctgcacgcggccagcggccgtcgtggccgcttcgtcgccttgaac
tgcggcgcgatcagcgaatcgctgctggaagcggagctgttcggctacagcgatggcgcc
ttcaccggcgcgcgacgcggtggtcgcgtcggtctggtcgaggccgctgacggcggcact
ctgttcctcgatgagatcggcgaactgccgttgccactgcagacccgcctgctgcgggtg
ctggaggagcgcgaagtcctgcgcgtgggtgccaccgaaccgacgccggtggacctgcgc
gtggttgctgcgacactgcaatcgctggaacagcgcgcagcgactggcagcttccgccgc
gatctgtattaccgcctggccgcgctgcgcatcgccctgccctcgctgcgtgcgcggcgt
ggcgatattccagtgctggcacagcacttcttccgccagctgcgcggcatcgacgcgcca
ctggatgacgctgcgatggcagtgttgaccgccgccgagtggcccggcaacgtgcgcgaa
ctgcgcaatctggtggatcgcctgcgcattcactggcagccggctgaagggcctattgat
gccgcgcgactgctgcagcttgcgcccgagctgacaagcgagggcgcgacagcactgcca
ttggaaagcaacggcaagcgcccgccgcgtgcgcagctggaaacattgctgcaggaacac
cgcaatgatcgcgaaggcatggcgcaggcgctgggcgtgtcacgcaccacgctgtggcgc
tggctgcgcgcggagggtttgtag
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