Stenotrophomonas cyclobalanopsidis: AB1723_10405
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Entry
AB1723_10405 CDS
T10607
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AB1723_10405 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyc03400
]
AB1723_10405 (ruvB)
Enzymes [BR:
scyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB1723_10405 (ruvB)
DNA repair and recombination proteins [BR:
scyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AB1723_10405 (ruvB)
RecFOR pathway proteins
AB1723_10405 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_16
Mg_chelatase
AAA_22
AAA_14
nSTAND3
TIP49
AAA_33
AAA_2
NTPase_1
Bac_DnaA
TsaE
RNA_helicase
AAA_18
Rad17
NB-ARC
DUF815
AAA_17
AAA_24
AAA_28
ABC_tran
Sigma54_activ_2
DUF87
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
XCZ85986
LinkDB
All DBs
Position
complement(2230981..2232021)
Genome browser
AA seq
346 aa
AA seq
DB search
MTDDRIIGAGATREDDAADASIRPKRLADYLGQAPVREQMEIYIQAAKARGDALDHVLIF
GPPGLGKTTLSHVIANELGVALRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPV
VEEVLYPAMEDFQIDIMIGEGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRL
EFYSVEELTRIVRRSAAILAIDCTADGAGEIARRARGTPRIANRLLRRVRDYAQVKAGGH
IDEAVAQAAMKMLKVDPEGFDELDRRLLKTMVDYFDGGPVGIESLAAALSEERGTLEDVV
EPYLIQQGFLVRTARGRMATHKAYRHMGLKPKNPPQDLFAEVPDVG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgatcgcatcatcggcgccggcgccacccgcgaggatgacgccgccgacgcc
agcatccgacccaagcgactggccgattacctcggccaggcgccggtgcgcgagcagatg
gaaatctacatccaggccgccaaggcccgtggcgacgcgctcgaccacgtgctgatcttc
ggcccacccggactcggcaagaccaccctcagccatgtcatcgccaacgaactgggcgtg
gcgctgcgggtgacctccggcccggtcatcgaaaaggccggcgacctcgccgcgctgctg
accaacctgcagccgcacgacgtgctcttcatcgatgaaatccaccgcctgtcgccggtg
gtcgaggaagtgctgtacccggcgatggaagatttccagatcgacatcatgatcggcgaa
ggccccgcggcccgctcgatcaagatcgacctgccgccgttcaccctgatcggcgccacc
acccgcgccggcctgctgaccgcgccgctgcgcgaccgcttcggcatcgtgcagcgcctg
gagttctacagcgttgaagaactgacccgcatcgtgcgccgttcggcggccatcctggcc
atcgactgcaccgccgacggcgcaggggagatcgcccgtcgcgcgcgtggcaccccgcgt
atcgccaaccgcctgctgcgccgcgtgcgcgactacgcccaggtcaaggccggcggccac
atcgacgaagccgtcgcccaggccgccatgaagatgctcaaggtcgacccggaaggcttc
gacgagctcgaccggcgcctgctgaagaccatggtcgactacttcgacggcggcccggtg
ggcatcgaatcgctggccgcggccctttccgaggagcgcggcaccctggaagacgtggtc
gaaccctacctgatccagcagggcttcctggtgcgcaccgcacgcggccgcatggccacc
cacaaggcgtaccggcacatgggcttgaagccgaaaaacccgccgcaggacctgttcgcg
gaggttcccgatgtcggttga
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integrated database retrieval system
