Stenotrophomonas cyclobalanopsidis: AB1723_11845
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Entry
AB1723_11845 CDS
T10607
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
scyc Stenotrophomonas cyclobalanopsidis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
XCZ86252
LinkDB
All DBs
Position
complement(2571275..2574295)
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AA seq
1006 aa
AA seq
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MSVAAPRPRRLTHCLLQALAIPAALAATVPIAWAGCDNLAPLAGQTVTCSAAAPNPQTLP
VIATGEAAIIVNVASGAQLQQSGGGSAISLVGAGGHQLGNQGAISSVGGIAVQLGGGSRV
DNLGSISTGNNTALQFVGAGDSVLVNRGTISGRTGVQFGAGNDRLEMLDGSISGGVLQGD
GNDVLLISGGTLDSVDQGNGDDQMTVGGGTITGLVTQGSGRDDFVMTGGTIGALQQGDNI
DTFRMSGGRIIGAFEDGDQAWMTGGRIGRVNMKLDKNLWDQSGGTVDGNVVTGFDTDTII
ISGTAYIGGNISVSGGNDSVTITDGTVRGQVLLSTGNDTFNWNGGGIVYGAIDGGPDDDV
VNLSNLNQANLGAVPLFDGGSGNDQLNFSNVKTTGVARFQNWEAISLASSTELTFDGDLV
LGDSGTGTGTLTLDDTSTLYAGNGAHALRPFAAGALVNVVNAGRIDLTGMGAGDVFSIRG
NYRGEGGGLYLRTVLAGDGSNSDRLVIDGGTASGTTGIGILNAGGGGAATLADGILVVQA
LNGGTTAANAFSLFAPVSAGAYEYFLFKGGVSAGTGENWYLRSTLVAGPTPAPNGNGNAT
PPPPTADVAPPPPIAPAPPPPPEDPIDPDLTAGETAPPPPPPEPAPVAPPTDPAVPDVPV
AGSSLPGADSTPPSPGARPAQGDVVPLYRLETAAYAVVPPLLRETSLASLGTFHERQGEQ
RLLYSNGAFRTAWGRLVGQSSEIHWKGDAQPDFDGDVMGVQAGLDVWAAAADNHRNQVGV
FVGRTRAQGRTTGLALGWENVQVGQSRLDDKHVGLYWTLTGSEGGYLDVVAMQSRYDGRV
RSSRGLGIDVKGDGTTLSLEAGKPLLQFGQSSWWLEPQVQVIWQRSSLDDRRDDVSAVRF
DSDNAWTGRVGLHLAGDYQLADNGWQPYFKVNYWHGRAGEDRIQFDSDTILNAQRSRALE
AGVGVIARFNRSISAYAVADYTRELGGDRNEKRRIIEGNIGLRADW
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttgccgcaccgcgtccgcgccgcttgacccattgcctgctgcaggccctcgcc
atcccggctgcactggccgccaccgtgcccatcgcgtgggcgggctgtgacaacctcgcc
ccgctggccgggcagaccgtcacctgcagtgccgcggcgcccaacccgcagaccttgccg
gtcatcgccaccggcgaggccgccatcattgtcaacgtcgccagtggcgcacagctgcag
cagagcggtggcggcagcgccatcagcctggtcggcgccggcggtcatcagctcggtaac
cagggggcgatcagttcggtcggtggcatcgccgtgcagctgggtggcggcagccgtgtc
gacaacctcggcagcatcagcaccggcaacaacaccgcgttgcagttcgtcggtgccggc
gacagcgtgctggtcaaccgcggcaccatcagcgggcgcaccggcgtgcagttcggtgcc
ggcaatgatcgcctggaaatgctggacggcagcatcagcggcggcgtgctgcagggcgat
ggcaacgacgtgctgctgatcagtggcggcacgctcgacagcgtcgaccagggcaacggc
gatgaccagatgacggtcggtggcggcaccatcaccggcctggtgacgcagggcagcggc
cgcgatgacttcgtcatgaccggcggcaccatcggcgcgctgcagcagggcgacaacatc
gacaccttccgcatgagcggcggccgcatcatcggcgcttttgaggatggcgaccaggcg
tggatgaccggcggccgcatcggccgggtcaacatgaagctggacaagaatctgtgggac
cagtccggcggcacggtcgacggcaacgtggtcaccggcttcgacaccgacaccatcatc
atctccggcacggcgtacatcggcggcaacatcagcgtcagcggcggcaatgacagcgtg
accatcaccgatggcaccgtacgcgggcaggtgctgctgagcaccggcaacgacaccttc
aactggaatggcggcggcatcgtctacggcgccattgatggcgggccggacgatgatgtg
gtcaacctcagcaacctcaaccaggccaatctcggcgcagtgccgctgttcgatggtggc
agcggcaatgaccagctcaacttcagcaacgtcaagaccaccggcgtggcccgcttccag
aactgggaagcgatcagcctggccagcagcaccgagctgaccttcgacggggacctcgtg
cttggcgacagcggtacgggcaccggcacgctcaccctggacgacaccagcacgctctac
gccggcaacggcgcgcatgcgctgcggccgttcgctgcgggcgcgcttgtcaatgtggtc
aatgccgggcgcatcgatctcaccggcatgggcgcaggcgatgtcttcagcatccgcggc
aactatcgcggcgagggcggcggactgtacctgcgcacagtgctggcgggggatggctcc
aacagcgaccggttggtcattgacggcggcacggccagtgggacgaccggcatcggcatc
ctcaacgctggcggcggtggcgcggcgacgctggccgacggcatcctggtggtgcaggcg
ttgaatggcggtaccaccgcggcgaatgcgttctcgctgttcgcaccggtatcggccggt
gcctatgagtacttcctgttcaagggcggcgtcagcgccggcaccggcgagaactggtat
ctgcgttcgaccctggtggctggcccgacgcctgcaccgaacggcaacggcaacgccacg
ccgccgccacccacggccgacgtcgcaccgccgccgccgatcgcgccggcaccgccaccg
ccgccggaggatccgattgatcccgatctgaccgccggcgagaccgcaccgccgccgccg
ccgccggagccggcaccggtggcaccgcccaccgacccggccgtacccgatgtgccggtg
gccggcagcagtctgcccggcgccgactcgaccccgcccagcccgggcgcacgcccagcg
cagggcgacgttgtaccgctgtatcgcctggaaaccgctgcctacgccgtggtgccgccg
ctgctgcgcgagacctcgctggccagtctcggtaccttccacgagcgccagggtgaacag
cgcctgctctacagcaacggcgccttccgcaccgcctgggggcgactggtgggtcagagc
agcgagatccactggaagggcgacgcacagcctgacttcgacggcgatgtgatgggcgtg
caggccggtctggatgtgtgggcggccgccgccgacaaccatcgcaaccaggtgggcgtg
ttcgtcggccgcacccgcgcgcagggcaggaccaccggcctggcgctgggctgggagaac
gtgcaggttggccaaagccgtttggatgacaagcatgttggcctgtactggaccctgacc
ggcagcgagggcggttacctcgacgtggtggccatgcagagccgctacgacggccgcgtg
cgttcctcgcgcgggctcggcatcgacgtgaagggcgatggcaccacgctgtcgctggaa
gccggcaagccgctgctgcagttcgggcagtcctcatggtggctggaaccgcaggtgcag
gtgatctggcagcgcagttcgctggatgaccggcgcgacgacgtgtctgcggtgcgcttc
gacagtgacaacgcctggaccggtcgcgtcggcctgcacctggccggtgattaccagttg
gccgacaacggctggcagccctacttcaaggtgaattactggcacggtcgcgcgggcgag
gaccgcatccagttcgacagtgacacgatcctcaatgcgcagcgctcgcgtgcgctggag
gcgggcgtaggtgttatcgcgcgcttcaaccgcagcatcagcgcgtatgcggtggccgac
tacacgcgtgagctgggcggtgaccgcaacgagaagcgccgcatcatcgaaggcaacatc
ggcctgcgcgcggactggtag
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integrated database retrieval system
