Stenotrophomonas cyclobalanopsidis: AB1723_11980
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Entry
AB1723_11980 CDS
T10607
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc00540
Lipopolysaccharide biosynthesis
scyc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AB1723_11980
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
scyc01005
]
AB1723_11980
Lipopolysaccharide biosynthesis proteins [BR:
scyc01005
]
Lipid A
AB1723_11980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
XCZ86276
LinkDB
All DBs
Position
2604591..2605652
Genome browser
AA seq
353 aa
AA seq
DB search
MRTAATLGLKGLLAVTALPLTAHAAQQCGPDAMSEHPPQVNFRVDNDLFGAKDQDQGYTN
GAQLTLVSPNLVDYTDDPCLPRLARWVNRHLERLHPGEFQQQNMIFSLGQGIYTPTDFTR
KDLIEDDRPYAGVLVASFGYNARRGDRLQTTLLTLGVVGPWAQGKQVQNAVHDLLGDEKF
QGWDNQLHNEPVVMYTHERMRRWPGDASVNAGGWGWDAISHYGGSIGNLETKANFGGEVR
FGWKLPDDFGSTPLRPAGENTAPTRGGKPSGWSWHLFATTDAAWVIRDITLDGNTFRDSH
SVDKRHVVAYGGYGIAVMRGRWKFAMARYHSTREFNGQREAPVFGSFTISRSL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgccgccaccctcggcctgaaaggcctgctggcggtcaccgccctgcccctc
actgcccatgccgcccagcagtgtggcccggatgcgatgagtgagcacccgccgcaggtc
aatttccgcgtcgacaacgatctgttcggcgccaaggaccaggaccagggctataccaac
ggcgcccagctgaccctggtctcgcccaacctggtggactacaccgatgacccctgcctt
ccgcgcctggcccgctgggtgaaccgccacctcgagcgcctgcacccgggcgagttccag
cagcagaacatgatcttcagcctcggccagggcatctacacgcccaccgatttcacccgc
aaggacctgatcgaggacgatcggccgtatgccggcgtgctggtggccagcttcggctac
aacgcccgccgcggcgaccgcctgcagaccaccctgctgactctgggcgtggtcggcccg
tgggcgcagggcaagcaggtgcagaacgcggtgcacgacctgctgggcgacgagaaattc
cagggctgggacaaccagctgcacaacgagccggtggtgatgtacacccacgagcgcatg
cgccgctggccgggcgatgccagcgtcaatgctggcggctggggctgggatgcgatcagc
cactacggcggctcgatcggcaacctggaaaccaaggccaacttcggtggtgaagtgcgc
ttcggctggaagctgcccgacgatttcggcagcaccccgctgcgcccggccggtgaaaac
accgcgccgacccgcggcggcaagcccagcggctggtcgtggcacctgttcgccaccacc
gatgcggcgtgggtgatccgcgatatcactctggacggcaacaccttccgcgacagccac
agcgtcgacaagcgccacgtggtggcctacggcggctacggcatcgcggtgatgcgcggc
cgctggaagttcgcgatggcgcgctaccacagcacccgcgagttcaacggccagcgcgaa
gccccggtgttcggcagcttcaccatcagccgctcgctgtag
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