Stenotrophomonas cyclobalanopsidis: AB1723_12390
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Entry
AB1723_12390 CDS
T10607
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc00010
Glycolysis / Gluconeogenesis
scyc00020
Citrate cycle (TCA cycle)
scyc00260
Glycine, serine and threonine metabolism
scyc00280
Valine, leucine and isoleucine degradation
scyc00310
Lysine degradation
scyc00380
Tryptophan metabolism
scyc00620
Pyruvate metabolism
scyc00630
Glyoxylate and dicarboxylate metabolism
scyc00640
Propanoate metabolism
scyc00670
One carbon pool by folate
scyc00785
Lipoic acid metabolism
scyc01100
Metabolic pathways
scyc01110
Biosynthesis of secondary metabolites
scyc01120
Microbial metabolism in diverse environments
scyc01200
Carbon metabolism
scyc01210
2-Oxocarboxylic acid metabolism
scyc01240
Biosynthesis of cofactors
Module
scyc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scyc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scyc_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
scyc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
scyc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
AB1723_12390 (lpdA)
00020 Citrate cycle (TCA cycle)
AB1723_12390 (lpdA)
00620 Pyruvate metabolism
AB1723_12390 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
AB1723_12390 (lpdA)
00640 Propanoate metabolism
AB1723_12390 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AB1723_12390 (lpdA)
00280 Valine, leucine and isoleucine degradation
AB1723_12390 (lpdA)
00310 Lysine degradation
AB1723_12390 (lpdA)
00380 Tryptophan metabolism
AB1723_12390 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AB1723_12390 (lpdA)
00670 One carbon pool by folate
AB1723_12390 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scyc04147
]
AB1723_12390 (lpdA)
Enzymes [BR:
scyc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
AB1723_12390 (lpdA)
Exosome [BR:
scyc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
AB1723_12390 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
FAD_oxidored
GIDA
Thi4
HI0933_like
FAD_binding_2
NAD_binding_8
DUF478
GCV_H
AlaDh_PNT_C
3HCDH_N
FAD_binding_3
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
XCZ86351
LinkDB
All DBs
Position
complement(2693468..2695276)
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AA seq
602 aa
AA seq
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MATIEVKVPDIGDYSDVPVIEVLVAVGETVKKDQGLVTLESDKATLEVPSSAAGVVKEIK
VKLGDTLSEGAVVVVLDAEGAAEAPAKAAAPAPAAAAPASKPPVTPSHRAPAEPAVPKPA
LSSGKPADIECEMVVLGSGPGGYTAAFRAADVGLDTVLVERYASLGGVCLNVGCIPSKAL
LHAAAVIDEVAHAGDFGVEFGKPTITLDKLRQYKDKVVNQLTKGLAGMAKQRKVRSVQGV
GKFVSANELEITAADGSTQLLRFQKCIIAAGSQAVKLPNFPWDDKRVMDSTDALELAEVP
GSLLVVGGGIIGLEMATVYGALGSKVTVVEFMDQLMPGADKDLVKPLADRLKKQGIEVHL
KTKASGVTADAKGISVTFEAAEEGQTPALAQGTFDRVLVAVGRSPNGRKIDAEKAGVQVT
DRGFIPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGHKKEWVARVIPSV
AYTNPEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEETHRIIG
GAIVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVAMASEIYDGTITDLYMPK
KK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggccacgattgaagtcaaggttcccgacatcggcgattacagcgatgtgccggtgatc
gaagtgttggtcgccgtcggcgagacggtgaagaaggatcagggtctggtgaccctggaa
tcggacaaggccaccctggaagtgccgtcctcggccgccggcgtggtcaaggagatcaag
gtcaagctgggtgacactctctccgaaggcgccgtggtcgtggtgctggacgctgaaggt
gccgccgaagccccggccaaggccgctgcgccggccccggcggcagccgccccggccagc
aagccgccggtgaccccgtcgcaccgcgccccggccgagccggcggtaccgaagccggcg
ctgtccagcggcaagccggccgatatcgaatgcgaaatggtcgtgctgggctcgggcccg
ggcggctacaccgctgccttccgcgccgccgacgtcggcctggacaccgtgctggtcgag
cgttacgccagcctcggcggcgtctgcctcaacgtgggctgcattccgtccaaggccctg
ctgcacgccgcagcggtcatcgacgaagtggcccatgccggtgatttcggcgtcgaattc
ggcaagccgaccatcaccctggacaagctgcgccagtacaaggacaaggtcgtcaaccaa
ctgaccaagggcctggccggcatggccaagcagcgcaaggtgcgcagcgtgcagggcgtc
ggcaagttcgtgtctgccaacgagctggaaatcaccgccgctgacggcagcacccagctg
ctgcgcttccagaagtgcatcatcgccgccggttcgcaggcggtgaagctgccgaacttc
ccgtgggacgacaagcgcgtgatggattccaccgacgcgctggagctggccgaagtgccg
ggctcgctgctggtcgtcggcggcggcatcatcggactggaaatggccaccgtgtatggc
gcgctgggcagcaaggtcaccgtggtcgagttcatggaccagctgatgccgggcgccgac
aaggacctggtcaagccgctggccgaccgcctgaagaagcagggcatcgaagtgcacctg
aagaccaaggcctcgggcgtcaccgccgatgccaagggcatcagcgtgaccttcgaagcc
gccgaggaaggccagacgccggccctggcgcagggcaccttcgaccgcgtgctggtggcc
gtgggccgctcgccgaacggcaggaagatcgatgccgagaaggccggcgtgcaggtcacc
gatcgcggcttcatcccggtcgatcgccagatgcgcaccaacgtgccgcacatcttcgcc
atcggcgacatcgtcggtaacccgatgctggcccacaaggccacgcacgaaggcaagctg
gccgctgaggtggccgccggccacaagaaggaatgggtcgcccgcgtgattccgtcggtg
gcctataccaacccggaaatcgcctgggttggcgtcaccgagaccgaagccaaggccaag
ggcctgaaggtcggcgtggccaagttcccgtgggccgccagcggccgcgcgatcggcatc
ggccgtaccgaaggcttcaccaagctgatcttcgacgaagaaacccaccgcatcatcggt
ggtgccatcgtcggcgtgcacgccggtgacctgctggccgagatcggcctggccatcgaa
atgggtgccgaagctgaagacatcggccacaccatccatgcgcacccgacgctgagcgaa
tcggtggcgatggcctcggaaatctacgacggcacgatcaccgatctgtacatgccgaag
aagaaataa
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