Stenotrophomonas cyclobalanopsidis: AB1723_14645
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Entry
AB1723_14645 CDS
T10607
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc03030
DNA replication
scyc03410
Base excision repair
scyc03420
Nucleotide excision repair
scyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB1723_14645 (polA)
03410 Base excision repair
AB1723_14645 (polA)
03420 Nucleotide excision repair
AB1723_14645 (polA)
03440 Homologous recombination
AB1723_14645 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scyc03032
]
AB1723_14645 (polA)
03400 DNA repair and recombination proteins [BR:
scyc03400
]
AB1723_14645 (polA)
Enzymes [BR:
scyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB1723_14645 (polA)
DNA replication proteins [BR:
scyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB1723_14645 (polA)
DNA repair and recombination proteins [BR:
scyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AB1723_14645 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB1723_14645 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
XCZ86754
LinkDB
All DBs
Position
complement(3196286..3199060)
Genome browser
AA seq
924 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLSNAQGEPTGALFGVVNMLRSTLKERPAYVAFVVDAPG
KTFRDDLYDQYKANRPPMPDDLRSQVEPMCRIVEALGISILRIPGVEADDVIGTLALQGV
AQDLKVTISTGDKDFAQLVRPGIELVNTMTGSRMDSDAAVMDKFGVRADQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYQHLDGVIAAAPSMKGKIGENLRAALERLPLNRELVTI
RTDVELEASPTTLALREQDVAALTELYARYGFTQALKELGGPLPAPAAASEATPSLRGTA
AGFARGSAEAPAAAALDPALSAPGKYETVLTSEQLQAWVERVQQADLISFDTETDALDAM
RARLVGVSLAVEPGKAAYIPVGHDYPGAPAQLPLQQVLDALRPVLQDPAKKKLGQHGKYD
LHVLRRHGVDVQGYHDDTMLESFVLNSTATRHDMDSLAQRYLGYTTIKFEDVAGKGAKQI
PFSQVGIDEASRYAAEDADITLRLHHALQPQLLAEPALDSVYRDIEMPLVPVLTRIEANG
VRIDADELRRQSQDLSSRMLAAQQKATELAGRSFNLDSPKQLQAVLFDELKLPAVVKTPK
GQPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVNPDTGRLHTSYHQSGA
ATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPEGFQLLAADYSQIELRIMAHLSEDPGLV
RAFEQGADVHRATAAEVFGRTLDEVTPNERRAAKAINFGLMYGMSAFGLARNLGIDRGQA
QDYVALYFSRYPGVRDFMERMRQQARDQGYVETLFGRRLYLNDIHARNQGLRAGAERAAI
NAPMQGTAADIIKRAMVSVDQWLHDSGAPARMILQVHDELVFESEAGFTEELRRNVIERM
SQAAQLRVPLEVDTGIGVNWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtaccgcgcgttccacgcgctg
ccgcccctgtccaatgcacagggcgagcccaccggcgcgctgttcggcgtggtcaacatg
ctgcgctcgacgctgaaggagcgaccggcctacgtcgccttcgtcgtcgacgcaccgggc
aagaccttccgcgatgacctgtacgaccagtacaaggccaaccgtccgccgatgcccgat
gacctgcgcagccaggtcgagccgatgtgccgcatcgtcgaagcgctgggcatcagcatc
ctgcgcatccccggggtggaagccgacgatgtgatcggcacgctggccctgcagggcgtg
gcgcaggacctgaaggtgaccatttccaccggtgacaaggacttcgcccagctggtgcgt
ccgggcatcgagctggtcaacaccatgaccggcagccgcatggattccgacgccgcagtg
atggacaagttcggcgtgcgcgccgaccagatcgtcgacctgctggcgctgatgggcgac
actgtggacaacgtgcccggcgtggagaagtgcggcccgaagaccgccgccaaatggttg
gccgaataccagcacctggatggcgtcatcgccgccgcgccgagcatgaagggcaagatc
ggcgaaaacctgcgcgcggcgctggaacgcctgccgctgaaccgcgagctggtgaccatc
cgcaccgatgtcgagctggaggcatcgccgaccaccctggccctgcgcgagcaggacgtg
gcggcattgaccgagctgtatgcgcgctacggcttcacccaggcgctgaaagagctgggc
ggcccgctgccggccccggccgccgccagtgaagccaccccgagcctgcgcggcaccgcc
gccggcttcgcccggggcagcgcagaagcgccggccgccgcggcgctggacccggcgctg
tccgcgcccggcaaatacgaaaccgtgctgaccagcgaacagctgcaggcctgggtcgag
cgtgtgcagcaggccgacctgatcagcttcgataccgagaccgatgcgctggacgcgatg
cgtgcacgcctggtcggcgtcagcctggcggtggagccgggcaaggcggcctatatcccg
gtcggccacgattaccccggtgcgccggcacagctgccgctgcagcaggtgctggacgcg
ctgcgcccggtgctgcaggacccggcgaagaagaaactgggccagcacggcaagtacgac
ctgcatgtgctgcgccggcatggcgtggacgtgcagggctaccacgacgacaccatgctc
gagagcttcgtgctcaattccactgccacccgccacgacatggattcgctggcccagcgc
tacctgggctacaccaccatcaagttcgaggacgtggccggcaagggggccaagcagatc
ccgttctcgcaggtgggcatcgacgaagccagccgctatgccgccgaggacgccgacatc
accctgcgcctgcaccacgcgctgcagccgcagctgctggccgagccggcgctggacagc
gtgtaccgcgacatcgagatgccgctggtgccggtgctgacccgcatcgaggccaacggc
gtgcgtatcgacgccgatgagctgcgccggcagagccaggacctgtcctcgcgcatgctg
gccgcgcagcagaaggccaccgaactggccgggcgcagcttcaacctggattcacccaag
cagctgcaggcggtgctgttcgacgagctgaagctgccggcggtggtgaagaccccgaag
ggccagcccagcacgaatgaagaggcgctggaggcgatcgccgaccagcacgagctgccg
cgggtgatccttgagtaccgcggtttggccaagctgcgcagcacctacaccgacaagctg
ccggagatggtcaacccggacaccggccggttgcacaccagctaccaccagtccggcgcc
gccaccggccgcctgtcttcgtccgacccgaacctgcagaacatcccgatccgtaccgag
gatggccgccgcatccgccgcgccttcgtggcgccggaaggtttccagctgctggcggcc
gactattcgcagatcgagctgcggatcatggcccacctgtccgaggacccgggcctggtg
cgtgccttcgagcagggcgccgacgtccaccgtgccaccgccgccgaggtgttcgggcgc
acgctggacgaggtgacgcccaacgagcgccgcgccgccaaggccatcaacttcggcctg
atgtacggcatgagcgccttcggcctggcccgcaacctgggcatcgaccgtggccaggcg
caggattatgtcgcgctgtacttcagccgatatcccggcgtgcgcgacttcatggagcgg
atgcgccagcaggcgcgtgaccagggctatgtggaaaccctgttcggacgccgcctgtat
ctgaatgacatccacgcccgcaaccagggcctgcgtgccggtgccgagcgcgcggcgatc
aatgcgccgatgcagggcaccgcggcggacatcatcaagcgggcgatggtctcggtggac
cagtggctgcatgacagcggcgccccggcgcggatgatcctgcaggtgcacgatgaactg
gtgttcgaaagcgaggccggtttcaccgaggaactgcgtagaaacgtgatcgagcgcatg
tcgcaagcggcccaattgcgggtgccgctggaggtcgatacgggcattggggtgaactgg
gatgaggcgcattga
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