Stenotrophomonas cyclobalanopsidis: AB1723_15050
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Entry
AB1723_15050 CDS
T10607
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AB1723_15050 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyc03400
]
AB1723_15050 (recC)
Enzymes [BR:
scyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AB1723_15050 (recC)
DNA repair and recombination proteins [BR:
scyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AB1723_15050 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
XCZ86818
LinkDB
All DBs
Position
complement(3299268..3302609)
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AA seq
1113 aa
AA seq
DB search
MTDPFSDFRLYHSNALDVLAALLARNVRTPVPGQPLLAPEVVLIPQVAMRRWLQATLAAE
YGVAANLEFLTPGEFVARALNANVDGETDDLDAAGLHWKLYQALRDPALLAQPPMRALQA
YLAGGDALKPWALAGELASVFEKYQAWRRDWLLRWDAGADPADPQAILWRAIAKGRGYRA
RRIQDYLDRFEGPDKPRPSGLPPRLSAFATLNISPDVLRVMATQARVGELHFYMPTPVQS
YWGDLQTLAERLRSGAPDPFGEAAGENRLLEAWGAAGRDFMAVLGSYEVVHPAGEIAAYS
DPENDTRPTLAEGGLADSLLHRLQRDLFHRRALPSGELREELRSDDPSLQVHACHTRLRE
LQVLHDQLRSLLQDPRFDPPLQAREIAVLAPDIDPYVPYLEAVFGGRGGDEEHIPYALAD
SSPLAGEPLADVFVHLLSLPVSRFGLNEILDLLASAPLAEAAGLEAVDFDRLHGWLQQAG
ARWGIDANHRGQLQAPRDDAYTWQFALDRLLLGHATGSDVDLAGVAPWIELEGGALDALD
RLLRLLRVLALYQRRLGETLPPAQWRQRLLSLLDALLPEAPGSPNSQRALERLRKLLNQF
ADDARKAGFEDGVPPEVVRAHFAGALSEADTRAPLLTGGISFGRMVPMRLLPFRVICVLG
LNDGDFPRRDPAAGLNQLTAELDTPRRRPGDRSTREDDRFLFLQLFAAAQDVFYLSYLGA
DPRDGTVREPSVLVSELIDAAAEYHQVPDVAKHAFTVRHALQPFSPAAFGEGDPRRFSYR
RQWHPAAGRMAGQRGGLQPWFDVALPPPLDDAVEDELALDTLRRFLCDPAGQFLAQALGL
RLADDVEEVEDLEPLVLSSRGPEKRSVQAAVVRATISGDVEPLYPRLRARGLLPSGALGE
RQFEAEQLKTRPYASAMLGWMQGQPLESRRYEVEIDGVRLHGRVADRHPEGLVRLRAGTL
NGNAVIRQGLDWLLANAAGDVLPLVQFHDGGDAGPGPHIQPAPGAAAARGALRALLKLRQ
RGLREPLRFAPYTGWVLFTAPVEKQRSEGWKQWHGSDRSWGEANSDAWQLLLRGADPFAD
DNSYADLLRNSQVVFGAVRDGRGPGGTGKEADA
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccgttcagcgacttccgcctttatcactccaacgcgttggacgtgctggcc
gccctgttggcccgcaacgtgcgcactccggtgccggggcagccgctgctggcgccggag
gtggtgctgatcccgcaggtggcgatgcgtcgctggctgcaggcgacactggcggccgag
tacggggtcgccgccaacctcgagttcctcaccccgggtgaattcgtcgcgcgggcgctc
aacgccaatgtcgatggcgaaaccgacgatctggatgctgccggcctgcactggaagctg
taccaggcgctgcgcgacccggcgttgctggcgcagccaccgatgcgtgcgctgcaggcc
tatcttgccgggggtgacgccctgaagccgtgggcgctggccggtgaactggcgtcggtg
ttcgagaagtaccaggcctggcgccgcgactggctgctgcgctgggatgccggcgccgac
ccggccgacccgcaggcgatcctgtggcgggccattgccaagggccgcggctaccgcgcg
cgccgcatccaggactacctcgaccgtttcgagggcccggacaagcccaggccaagcggc
ctgccgccgcgcctgtcggcgttcgccacgctgaacatctcgcccgacgtgctgcgggtg
atggccacccaggcccgggtcggcgagctgcacttctatatgccgaccccggtgcagtcg
tactggggcgacctgcagaccctggccgagcgcctgcgcagcggcgcacccgatcccttt
ggcgaagccgccggcgagaaccgcctgctggaagcctggggtgcggccggccgcgacttc
atggccgtgctgggcagttacgaagtggtgcacccggccggtgagatcgccgcgtactcg
gatcccgaaaacgacacccgcccgaccctggccgagggcgggctggccgacagcctgctg
caccgcctgcagcgcgacctgttccaccgccgcgcgctgccatcgggcgagctgcgcgag
gaactgcgcagcgatgaccccagcctgcaggtgcacgcctgccacacccgtctgcgcgaa
ctgcaggtgctgcacgaccagctgcgcagcctgctgcaggacccgcgcttcgacccgccg
ctgcaggcccgcgagatcgcggtgctggcaccggacatcgatccctacgtgccgtacctg
gaagccgtgttcggtggccgtggcggcgacgaggaacatattccctatgcgctggccgac
agcagcccgctggcgggcgagccgctggccgatgtgttcgtgcacctgctgtcgttgccg
gtatcgcggttcggcctgaacgagatcctcgacctgctggccagcgcgccgctggccgag
gcggccgggctggaggcggtggacttcgaccgcctgcatggctggctgcagcaggccggc
gcccgctggggcatcgacgccaaccatcgcggccagctgcaggcaccgcgtgacgacgcc
tacacctggcagttcgcgctggaccgcttgctgctgggccacgccaccggcagcgatgtc
gacctcgccggcgtggcaccgtggatcgagctggaaggcggcgcgctggacgcgctggac
cgtctgctgcgtctgctgcgcgtgctggcgctgtaccagcgccgcctcggcgagaccctg
cccccggcgcagtggcggcagcgcctgctgtccctgctggatgcgctgcttccggaagca
cccggttcgcccaacagccagcgcgcgctggagcgcctgcgcaagctgctcaaccagttc
gccgacgacgcccgcaaggccggcttcgaagacggcgtaccgccggaggtggtgcgtgcg
cacttcgccggcgcgctgtccgaggccgatacgcgtgcgccgctgctgaccggtggcatc
agcttcggccgcatggtgccgatgcgcctgctgccattccgggtgatctgcgtgctgggc
ctcaacgatggcgatttcccacgccgcgatccggccgccggcctgaaccagctgaccgcc
gagctggacacgccgcgccgtcgcccgggcgaccgctccactcgcgaggacgaccgcttc
ctgttcctgcagctgttcgccgccgcgcaggacgtgttctacctgagctatctcggcgcc
gacccgcgcgatggcaccgtacgcgagccctcggtgctggtcagcgagctgatcgacgcc
gccgctgagtaccaccaggtgccggacgtcgccaagcacgcgttcaccgtgcgccacgcg
ctgcagcctttctcgcccgccgcctttggcgagggcgatccgcgtcgtttcagctaccgc
cgccagtggcatccggccgctggacgcatggccggccagcgcggcgggctgcagccgtgg
ttcgacgtcgcgctgccgccaccgctggacgatgccgtggaagacgagttggccttggat
acgctgcgccgcttcctgtgcgacccggccggtcagttcctggcccaggcgctgggcctg
cgcctagccgacgatgtcgaggaggtggaggacctggagccgctggtgctgtcctcgcgc
ggcccggaaaaacgcagcgtgcaggccgcagtggtgcgcgccaccatcagcggtgatgtc
gagccgctgtacccgcgcctgcgtgcccgcggcctgctcccgtcgggtgcgctgggggag
cgccagttcgaagccgaacagctcaagacccgcccctacgccagcgcgatgctgggctgg
atgcaggggcagccgcttgaaagccgccgctatgaagtcgagatcgacggcgtgcgcctg
cacggtcgcgtcgctgatcgccatcctgaaggcctggtgcgcctgcgcgctggtacgctc
aacggcaacgcggtgatccgccagggcctggactggctgctggccaatgcggccggcgat
gtgctgccactggtgcagttccacgatgggggtgatgccggccccggcccgcacatccag
cctgcaccgggcgcggcggccgcacgcggtgccctgcgcgcgctgctgaagctgcgccag
cgcggcctgcgcgagccgctgcgcttcgccccctataccggctgggtgctgttcaccgca
ccggtggaaaaacaacgcagcgaaggctggaagcagtggcacggcagcgaccgcagctgg
ggcgaagccaacagcgacgcctggcagctgctgctgcgcggcgccgatcccttcgccgat
gacaacagttacgccgacctgctgcgcaacagccaggtggtattcggcgcggtgcgcgac
gggcgtggcccgggtggcaccggcaaggaggccgacgcatga
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