Stenotrophomonas cyclobalanopsidis: AB1723_15490
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Entry
AB1723_15490 CDS
T10607
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AB1723_15490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyc03400
]
AB1723_15490
DNA repair and recombination proteins [BR:
scyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AB1723_15490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
DUF6033
Motif
Other DBs
NCBI-ProteinID:
XCZ86900
LinkDB
All DBs
Position
3400181..3401110
Genome browser
AA seq
309 aa
AA seq
DB search
MARPIWTGTLSFGLLNVPVSLMSGERKVDLQFRMLDSRDRKPIRFERVNADTGEEVPWKD
IVKAFEYDKGSYVVLEEGDIRSAAPESHETVEVESFVDAAQIDPRYFEKPYLLVPGKKAE
KGYVLLRETLRSTGKVGIARVVVRTREYLCAVMPHEDALVLMILRYPQELVDPEDYKLPT
GSLSDYRITSKETAMAEQLIESMAGDWDPTQYHDEFRERLQQVLNKRIKAKGGTTQVEEE
PVAREDASTNVVDFMALLQKSLEANKRTPAKKTATRKAPAKKDAKKATKKTAGKAAKSTK
KATPRRKAG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcccgatctggaccggtaccctctccttcggcctgctgaacgtgccggtgtcg
ctgatgtccggcgaacgcaaggtcgatctgcagttccgcatgctcgattcgcgcgaccgc
aagccgatccgcttcgagcgggtcaacgccgataccggcgaggaagtgccgtggaaggac
atcgtcaaagccttcgagtacgacaagggcagctacgtcgtgctggaagaaggcgacatc
cgctcggccgcaccggagagccatgaaacggtggaggtggaatcgtttgtcgacgccgcg
cagatcgatccccgctacttcgaaaagccctacctgctggtgccgggcaaaaaggccgag
aaaggttacgtgctgttgcgcgagacgctgcgcagcacaggcaaagtgggtatcgcccgg
gtagtcgtgcgcacgcgcgagtatctctgtgcagtgatgccccatgaagacgcgctggta
ttgatgatcctgcgctacccgcaggaactggtcgatccggaggactacaagctgcctacc
ggcagtctttccgattacaggatcaccagcaaggaaaccgcgatggccgaacagttgatc
gagtcgatggccggtgactgggatcccacgcaataccacgatgaattccgcgagcgcctg
cagcaggtgttgaacaagcgcatcaaggccaagggcggcaccacccaggtggaagaggag
ccggtggcgcgcgaggatgccagcaccaacgtggtggacttcatggcgctgctgcagaag
agccttgaggccaacaagcgcacgccggcgaagaagaccgcgacgcgcaaggcaccggcg
aagaaggatgcgaagaaagccacgaagaaaaccgccggcaaggctgccaagtcgacgaag
aaggccacaccgcgccgcaaggcaggctga
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