Stenotrophomonas cyclobalanopsidis: AB1723_15525
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Entry
AB1723_15525 CDS
T10607
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
scyc Stenotrophomonas cyclobalanopsidis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyc03000
]
AB1723_15525
Transcription factors [BR:
scyc03000
]
Prokaryotic type
Helix-turn-helix
Other families
AB1723_15525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
AAA_5
HTH_30
AAA_2
HTH_28
HTH_23
HTH_Tnp_ISL3
HTH_1
AAA_16
HTH_7
HTH_29
HTH_22
AAA
HTH_20
Phage_CP76
HTH_IclR
NACHT
nSTAND3
AAA_7
HTH_50
ATPase
Motif
Other DBs
NCBI-ProteinID:
XCZ86907
LinkDB
All DBs
Position
3410472..3412358
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AA seq
628 aa
AA seq
DB search
MSQPILPERVGGARRAFFERGASPAGAVPDAILQSWRRCQRQGLSVDARPDVAPVPEVSL
RELRQRRERLWRLVRPELEGLASSLASSDGIVLLTDEEGWVLDAEGSNSFLDRAGQVALM
PGVRWDEGTVGTNAIGTAIVEGRALQVRGGEHFFAPHGILTCSATPIFDPFGQRVGVLDI
SGDARHAHLHALALGRHAVDQIEHRYFADGLDDCELLHLHAQPLLLGSPREALLGFRNGR
LVAANRVGLGLFGLDRHDIGHASYEALFDQPLSRLHDDGMLLDRQGRALYGHSDGSRHTR
AAGAVVARTPRVSPAAAAPALLAAPGTVLATPVQQQLRQAVRVLDAGLPVLVQGETGTGK
EVFARELHRRCARAGQPLVAVNCAALPEGLIEAELFGYEEGAFTGARRQGSTGLLRQAQG
GVLFLDEIGDMPLALQPRLLRVLQERELSPLGGGRPVKLDFALVCASHCDLQQAVAEGRF
RADLYYRIADHVVHLPALRELDERGALLQALWSPMAQGRVLQAEVLQVLQRQRWPGNLRQ
LQACLRTLVALSDPGEQITPAHLPAELLKVPMVQAADASTAPGGLRDIAEDAMRQALQDA
DGNVTAAARQLGISRSTLYRRLGQPAAR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccagccgattcttccagagcgcgtgggtggcgcgcgccgtgcctttttcgagcgc
ggcgcctcgccggccggggcggtacccgacgccatcctgcagtcgtggcggcgctgccag
cggcagggcctgtcggtggacgcgcggcccgacgtggcaccggtgcccgaggtgtcactg
cgtgaactgcgccagcgtcgcgagcgcctgtggcggctggtccggccggaactggaaggg
ctggcaagctcgctggccagcagcgatggcatcgtgctgctcaccgacgaggaaggctgg
gtgctggacgccgagggcagcaacagcttcctcgaccgcgctggacaggtcgccctgatg
ccgggggtgcgctgggacgaaggcacggtcggcaccaatgccatcggcacggccatcgtc
gaaggccgtgccctgcaggtgcgcggcggcgagcacttcttcgccccgcacggcatcctg
acctgctcggccacgcccatcttcgatccgttcgggcagcgcgtcggcgtgctcgacatc
tccggcgatgcgcgccacgcccacctgcatgcgctggcgttgggccgccacgcggtggat
cagatcgagcaccgctatttcgccgatgggctggatgactgcgagctgctgcacctgcat
gcgcagcccctgttgctgggcagcccgcgcgaggccctgctgggcttccgcaatggccgc
ctggtagccgccaaccgggtcggcctgggattgttcgggctggaccgccacgacatcggc
cacgcgtcctacgaggccctgttcgaccaaccgctgtcgcgcctgcatgacgacggcatg
ctgctggaccggcagggacgtgcgctgtacggccacagtgacggcagccgccatacgcgt
gccgctggcgccgtggttgcgcgcacgccccgcgtgtcccctgccgccgccgcgcccgcg
ctgctggcggcacccggcacggtgctggcgacgcctgtgcagcagcagctgcgccaggcg
gtgcgggtgctggatgcggggctgccggtactggtgcagggcgagaccggcaccggcaag
gaagtcttcgcgcgcgagctgcatcgccgctgcgcgcgtgccggccaaccgctggtggcg
gtgaactgcgcggcactgcccgaaggcctgatcgaagccgagctgttcggctacgaggaa
ggcgcgttcaccggcgcgcgccggcagggcagtaccggcctgctgcggcaggcgcagggc
ggcgtgctgttcctggatgagatcggcgacatgccgctggccctgcaaccgcgcctgctg
cgcgtgctgcaggaacgcgagctgtcaccgctgggcggtggccgcccggtgaaactggac
ttcgccctggtctgtgccagccactgcgacctgcagcaggccgtggccgaggggcgcttc
cgggctgatctctactaccgcatcgccgatcatgtcgtgcatctgccggccctgcgtgag
ctggacgagcgcggtgccctgctgcaggcgctgtggtcaccgatggcgcagggccgcgtg
ctgcaggcggaggttctgcaggtgctgcagcggcagcgctggccaggcaacctgcgccag
ctgcaggcctgcctgcgcacactggtggcgttgagcgacccgggtgagcagatcacgccc
gcgcacttgcctgccgaactgctgaaggtgccgatggtacaggcggctgacgccagcact
gcaccgggcgggctgcgtgacatcgccgaggacgcgatgcggcaggccctgcaggacgcc
gacggcaatgtcaccgccgcagccaggcagctgggtatcagccgcagcacgctgtaccgg
cgcctgggccagcccgccgcgcgctga
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