Stenotrophomonas cyclobalanopsidis: AB1723_17540
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Entry
AB1723_17540 CDS
T10607
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
scyc Stenotrophomonas cyclobalanopsidis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
DUF4595
KhtT_N
Motif
Other DBs
NCBI-ProteinID:
XCZ87272
LinkDB
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Position
complement(3853637..3857611)
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AA seq
1324 aa
AA seq
DB search
MSATPCDVKTGEKYEIAEDFDLGWINLTRHYHSGISTSIGGFGHGWTHSLDVQLALDGND
NVGLIEGTGYQRPFKRVGQAFEAADGSGDRLVQNGNWTLYSADAISTFGANGRLTAKRFV
DGTSLTYLYDDSDRIAAVVHSSGRRLEFVYPSNDYDALISAVLVEGLPLTTYTYTPQNQV
ATVTYAGGGVRTYHYENSSFPRHLTGITAEDGRRYSTFIYDSIGRVISSQHAGGADGVTL
AYSPAGGAVVTDALGRQTDYTLTPGGATAPPRKVAGVSDSQGAVSRTYYDQSVDFRRRLD
TYTDQRGVQTKHTYAEATDPASGRPVSIHTINEAVGTSEQRTTLITRDMQTNVVLATQVG
NRNVGTTYNARRQPTATTVTDTATSQARTTLYSYCDAADVAAAGDCPVEGLLKRVDGPRT
DVADTATYAYYAGDDAGCATNGGCTYRKGDLRSVTNALGQTVETLAYDTYGRPLSVKDAN
GVVTDYTYHARGWPTSVTVRGATTAEDRSTQISYWPTGQVQQITEPDGSSVTYVYDAAQR
LTDVADSAGNTIHYTLDNAGNRLNESTVDAGGTLRRTLARTYNTLGQLTAVKDASGHATG
FTYDASGNPQTVTDALQRVTSQQYDPLNRLAQTLQDVGGVEAEILSTYNALDQVTQVTDP
KGLHTTYAYNGFGDLTGQVSPDSGTSSFTVDAAGNRKTRTDARGITATYTYDALNRLIGV
AYPDPNLDIGYSYDVAPAACAANERFAKGRLVQVLHANGSTLYCHDRFGQVTRKVQTVNG
VASTLRYTYSKSGSLASLTYPDGSVADYVRDTLGRISQIGLTRPGQARQVVVNGVTYAAF
GPATGWAYGNGRQLQRTLDLDYRPKAVHDPAAGGLSLGFGYDPVGSITELKNGTGSAVLA
KYAYDSLGRLTQTQDGATSTPIETYGYDATGNRTSLTTSAGTSTYSYPATSHRLTAVDGE
ARNHDAAGNTTSIGGKTFAYNDANRMNAVKQGNAVLESYAYNHRGERVLRTPTGGAAQIT
LYDEAGQWLGNYSATGQPQQQAIWLDNYPVALINVAATGVPELAYIQPDHLGTPRVVIDP
VRDVAIWEWSNKSEVFGDQAPANDPDGDGVAFELALRFPGQQATDASGMFYNYQREYDPA
VGRYSQSDPIGLEGGIGTYSYVAGSPASSVDPFGLESCECISASYSQIKKQLPSKSIPRQ
VGDGVSSYITGVAWGAAALTGRDGWWGRGAQEEAIRTHTQLNAVLSQVSSHPGQTATAVS
AVASKYPVQLLSRAASGLGVSYIYSPAVGIPVTGLAVYGSSFRAAYKHPDAVAAAAIVGE
EVCR
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcaaccccctgcgatgtgaaaaccggcgaaaagtatgaaatcgccgaagacttc
gaccttggctggatcaatctgacccggcactatcactccggcatatccaccagcatcggg
ggttttggccacggctggacgcactcattggatgtgcagttggcgttggatggcaacgac
aacgtgggccttatcgaaggtacaggctaccagcgtcccttcaagcgagtggggcaggca
ttcgaagctgctgatggcagcggtgatcgtcttgtccagaacggcaactggaccctgtac
tcggccgacgcgatctccacctttggtgcaaacggccgcctgaccgcgaaacgattcgtg
gacggcacctcactgacctatctctacgacgacagcgatcgcatcgcggccgttgtgcac
agcagtggccgcaggctggagttcgtctacccatcgaacgattacgatgcgttgatcagc
gcggtgctggtggaaggcctgccgctcaccacatatacctacaccccgcagaaccaggtg
gccacggtgacgtacgcgggaggaggtgtgcggacgtaccactacgaaaacagcagtttc
ccccggcacctgaccggcatcaccgctgaggatggccgacgctacagcaccttcatctac
gattcgatcggtcgcgtcatctccagccaacacgcaggcggagccgatggcgtaaccctc
gcctacagccccgcaggtggtgcggtggtgaccgacgcactcggtcgccagaccgattac
accctgacgccgggtggtgccacggcgccgccacgcaaggtcgcgggcgtgagcgattcc
cagggcgcggtaagccgcacgtactacgaccagagcgttgatttccgtcgccggctcgac
acctacaccgaccagcgcggcgtccagaccaagcacacctacgcagaagccaccgatccg
gcgagtggccgcccggtgagcatccacacgataaacgaagccgtcggtacgtcggaacag
cgcacgacgctcatcacgcgcgatatgcagaccaacgtggtgctggccacccaggtgggc
aaccgcaacgtcggcacgacctataacgcccgccgccagcccaccgctaccaccgtaacc
gacacggctaccagccaagcgcgcacaaccctctacagctactgcgacgctgcggatgta
gccgccgcgggcgactgcccggtggagggcctgttgaagcgtgtggacggcccccgcacc
gacgtggccgacaccgccacatacgcctactacgccggagacgacgccggatgcgcgacc
aatggtggctgcacctatcgcaagggcgatctgcgcagcgtcaccaatgcactcgggcag
acagtggagacgctggcctacgacacctacgggcggccgctgtcagtgaaggatgccaat
ggtgtggtcaccgactacacctaccatgcccgtggctggccgacttcggtcaccgtgcgt
ggggccaccacggctgaggatcgatccacccagatcagctattggccgaccggccaggtg
cagcagatcaccgagcccgatggcagcagcgtgacctatgtgtacgacgccgcgcagcgg
ctgaccgacgtggctgacagtgcaggcaacacgatccattacacgctggacaatgccggc
aaccgcctcaacgaaagcaccgtggatgcaggcggcacgctgcggcgtaccttggcccgc
acctacaacaccctgggccagttgaccgccgtgaaggatgccagcggccacgccaccggt
ttcacctacgacgccagcggcaacccgcagacggtcaccgacgccctgcagcgcgtgacc
agccagcagtacgatccgctgaaccgtctggcgcagacgctgcaggacgtgggcggcgtg
gaggcggagatcctatccacctacaacgcgctggaccaggtgacccaggtgaccgacccc
aagggcctgcacaccacctatgcctacaacggcttcggcgacctgaccgggcaggtgagc
ccggatagcggcaccagcagcttcaccgtggacgcggcgggcaaccgcaagacgcgcacc
gatgcgcggggcatcaccgccacgtacacctacgatgcactcaaccgtttgatcggcgtg
gcctacccggaccccaatctggatatcggctacagctacgacgtggccccggctgcctgt
gccgccaacgagcgcttcgccaaggggcgtctggtgcaagtgctgcacgccaatggcagc
accctgtattgccacgaccgcttcggccaggtcacccgcaaggtgcagaccgtcaatggc
gtcgccagcaccttgcgctacacctacagcaagtccggtagcctcgcatcgttgacctac
ccggatggcagtgtggctgactacgtgcgcgacacgctgggccgcatcagccagataggc
ctgacccggccagggcaggcgcggcaagtggtggtcaatggagtcacctacgcagctttc
ggcccagccaccggctgggcctacggcaacggccgccagttgcagcgcaccctggatctg
gactatcgcccgaaggccgtgcacgacccggctgccggcggcctgtccttgggttttggc
tacgatccggttggctcgatcaccgaactgaagaacggcacaggttcggccgtgcttgcc
aagtacgcctacgattcgttgggtcggctgacccagactcaggacggtgcaacgagcacg
ccaattgaaacctatggctatgacgccacgggcaaccgcacctcgctcaccacatcggct
ggcacgtcgacttacagctatccggccaccagccatcgcttgaccgcagtggatggcgaa
gcccgcaaccatgacgcagcgggcaacaccaccagcatcggcggcaagacgttcgcctac
aacgatgccaaccgcatgaacgcggtgaagcaaggcaacgctgtgctggaaagctacgcc
tacaaccaccgtggcgagcgtgtgctgcgcacgccgactggtggcgcagcgcagatcacc
ctgtatgacgaagcggggcagtggctgggcaactactcggcaacgggccagccgcagcag
caagcgatctggctggacaattacccggtggcgctgatcaatgttgctgctactggcgtg
ccggagctggcctacattcagccggatcacctgggtacgccgcgtgtggtgatcgacccg
gtgcgggatgttgcaatctgggagtggagcaacaagagcgaggtatttggcgatcaggca
ccggccaatgatcctgatggagatggggtggcgttcgaactggcgctgcgtttcccgggg
cagcaggcgacggatgcgagcgggatgttctacaactaccagcgggagtatgacccggcg
gtggggcggtactcgcagagtgatccgattgggttggagggagggattggcacgtatagc
tatgttgcaggaagccccgcgagcagtgttgatcctttcgggctggagagttgcgaatgc
atttctgcctcttacagtcagatcaagaagcagctgccaagcaagagtatcccacgacaa
gttggcgatggtgtatccagctacatcacgggggtcgcatggggggcggcagctctcact
ggtcgcgacggctggtggggccgaggggctcaagaggaagcaatccgtacccatactcaa
ctgaacgccgtgctctcccaagtatcctcgcaccctggccagactgcgacggcagtaagt
gcggtagcatccaagtatcccgtacagctattaagccgcgctgcctcgggtctcggtgtc
agttatatatattcaccagcggtagggattccggtaaccgggctcgctgtctatggttca
tcttttagagctgcttataagcatcctgatgctgttgcagcggcggcaatagttggcgag
gaggtttgccggtga
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