Stenotrophomonas cyclobalanopsidis: AB1723_17785
Help
Entry
AB1723_17785 CDS
T10607
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
scyc Stenotrophomonas cyclobalanopsidis
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyc03000
]
AB1723_17785
03036 Chromosome and associated proteins [BR:
scyc03036
]
AB1723_17785
Transcription factors [BR:
scyc03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
AB1723_17785
Chromosome and associated proteins [BR:
scyc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AB1723_17785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
MarR
NirdL-like_HTH
GntR
HTH_Crp_2
HTH_11
MarR_2
LexA_DNA_bind
HTH_20
DUF7343
DDRGK
HTH_47
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
XCZ87320
LinkDB
All DBs
Position
complement(3906499..3906978)
Genome browser
AA seq
159 aa
AA seq
DB search
MATRPRELDKIDRKILRILQAEGRISFTELGERVGLSTTPCTERVRRLEREGVITGYHAH
LDPAALKASLLVFVEISLAYKSGDIFEEFRRAALKLPNVLECHLVSGDFDYLLKARISEM
ASYRKLLGSTLLTLPHVRESKSYIVMEEVKETWALPIAD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggccacacgcccgcgcgagctggacaagatcgaccgcaagatcctgcgcatcctgcag
gccgagggccgtatttccttcaccgagctgggtgaacgggtcggcctgtcgaccacaccc
tgcaccgagcgcgtgcgccggctggagcgcgaaggggtcatcaccggctaccacgcgcac
ctcgacccggcggccctgaaggccagcctgctggtgttcgtggagatcagcctggcctac
aagtccggcgacatcttcgaggaattccgccgcgcggcgttgaagctgcccaacgtgctg
gaatgccacctggtctcgggcgatttcgattacctgcttaaggcgcgcatcagcgagatg
gccagctaccgcaagctgctgggcagcaccctgctgaccctgccgcacgtgcgcgaatcg
aagagctacatcgtgatggaagaagtgaaggagacctgggcgctgccgatcgcggattga
DBGET
integrated database retrieval system
