Stenotrophomonas cyclobalanopsidis: AB1723_18025
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Entry
AB1723_18025 CDS
T10607
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc00051
Fructose and mannose metabolism
scyc00541
Biosynthesis of various nucleotide sugars
scyc01100
Metabolic pathways
scyc01250
Biosynthesis of nucleotide sugars
Module
scyc_M01019
GDP-6-deoxy-Tal biosynthesis, GDP-Man => GDP-6-deoxy-Tal
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
AB1723_18025 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AB1723_18025 (gmd)
Enzymes [BR:
scyc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
AB1723_18025 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
Ald_deCOase
Motif
Other DBs
NCBI-ProteinID:
XCZ87366
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Position
3962988..3964028
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AA seq
346 aa
AA seq
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MSIRKAIITGVTGQDGAYLTQLLLEKGYKVYGTYRRTSSVNFWRLDEVGVTNHPDLELVE
YDLTDLGASLSMVQRIQPDEIYNLAAQSFVGVSFDQPSTTAQITGVGALNLLEAIRLVNP
KIRFYQASTSEMFGKVQAVPQIEETPFYPRSPYGVAKLYAHWITVNYRESYDIFASSGIL
FNHESPLRGREFVTRKITDSVAKIKLGQLDVLELGNLDAKRDWGFAKEYVEGMWRMLQAD
EPDTFVLATNRTETVRDFVRMAFKGAGIDVEFKGQDIDEVAVDASTGKTVMRINPKFHRP
AEVDLLIGNPEKAERILGWKPQTTLEQLCQMMVEADLKRNERGFSF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaggaaggcaatcatcacgggcgttaccggtcaggacggtgcttacctgacc
cagttgctgcttgagaagggctataaagtctatggaacgtatcggcgtacgagttcggta
aacttctggcggctggatgaggtgggtgtcaccaaccaccccgatcttgaactggtcgag
tatgacctgacggatcttggcgcatccttgtcaatggtgcagcggatccagccggacgag
atctacaaccttgccgcacagagtttcgttggtgtcagctttgatcagccgagcaccacg
gcccagattaccggggttggcgcgctcaatttgcttgaggcgatccgcctcgtcaatccg
aagatccgtttctatcaggcctcgacgtcggaaatgttcggcaaggtgcaggccgttccg
cagatcgaagagactcctttctatcccaggagtccctacggtgtagcaaagctctacgcc
cattggatcaccgtcaactatcgtgaaagctacgatattttcgcttccagcggcatcctc
ttcaatcatgagagtccgttgcgcggccgtgagttcgtcacgcgcaagattaccgactcg
gtagccaagatcaaactggggcagctggacgtgctggagcttggaaatctggacgcgaag
cgcgactggggttttgccaaggaatacgtcgagggcatgtggcgcatgctgcaggccgat
gagcctgacacgtttgtcctcgcaaccaatcggaccgaaaccgtgcgtgatttcgtccgc
atggctttcaagggggcaggcatcgacgtggagttcaagggacaggacatcgacgaagtt
gcagtggatgcatcgacgggcaagaccgtgatgcggatcaacccgaaattccaccgccct
gctgaagtcgatctcctgatcggcaatccggagaaggccgagcgcattctcggctggaag
ccgcagacgacgcttgaacagctttgccagatgatggttgaggcggatctcaagaggaac
gagcgtggattctcgttctga
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