Stenotrophomonas cyclobalanopsidis: AB1723_18115
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Entry
AB1723_18115 CDS
T10607
Name
(GenBank) DEAD/DEAH box helicase
Organism
scyc Stenotrophomonas cyclobalanopsidis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Motif
Other DBs
NCBI-ProteinID:
XCZ87383
LinkDB
All DBs
Position
complement(3982653..3985970)
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AA seq
1105 aa
AA seq
DB search
MSLHYTDEDLARWFDDATLTRSERCMGGVSQLERHGDVLIAEVQGTAARPYRAKIDLAAS
MRTPRSRLQGDCSCPVGQNCKHMGATLMVYLLDGAIEDDEWFPVGAGTEGGLEQPVRPQL
LAELSRWQAMRSQPAKPVRNGVVFELSTVNHRPSVLMRKVKYLGDGGIEFGKWTEITAEM
LLTPPNYLTPADISVIAQLWAERRATTPEPRIDIGATLALIVASGHGWVFCGRDRVPARA
GAPRQGMLHWEVDEVDGELLSFPSLHLDGDAEGLVLGNAAGYLDPVTGEVGPLLLDVSIQ
DADFFLSLPPLLPTEAPVVAQVLQQMDPALPRPGSVDAMRTLQISAMTPVLRLHSFEYRP
AWMSRRGPSRWADFATVAFEYDEHVRFLDDPNVFVHDANGELALLPRDPAEEARRERELR
GFHLHRDTAPRASLEGAGPQFVLRSQDWTRLMLQDVPQLEALGWKVEVDDDFRHRITLID
DIDLDIQPSQTEDGWFDLGLDIQVDGRTVPLAPLLHTVLQTDPRWLRGQIDAIDDDEHVM
LSANDNTHLAIRAARLKPVIALLADLFTQRDAPLRVSARDRGRLRALQDDARLRFKGHQD
TRALVQRLIQTPAPTEVTPPAGLAASLRPYQLQGLAWLQYLRQQDLGGVLADDMGLGKTL
QTLAHILLEKEQGRLQQPALVVVSTSLLHNWTGEAARFTPDLRVLALHGADRATHFDRIG
EHDLVLTTYPLVWRDEEALLAHDYHLLILDEAQQVKNAKSKAAIALRTLHARHRLCLTGT
PLENHLGELWAQFDFLLPGLLGNEKQFNQHWRHPIERGSDPQRAHLLAQRLRPFMLRRRK
AQVAAELPPKSEITRTVALEGAQRDLYETVRASMEAKVREAVAAQGLSRSHILVLDALLK
LRQVCCDPRLLPGETGRRSAPSAKLDLLRDMLPEMVEEGRRILLFSQFTSMLALIAEALD
GMGLAHVQLTGDTQDRATPVQRFMAGEVPIFLISLKAGGVGLNLTAADTVIHFDPWWNPA
AERQATDRAHRIGQQQPVFVYRLIAAGSIEERIAELQQRKAALADSILEGGNASGPRFND
EDLEALLAPLPGVVPKGKRGRPARA
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcactacaccgacgaggatctggcccgctggttcgatgacgccacgctgacc
cgcagcgagcggtgcatgggcggagtaagccagctggaacgccacggcgatgtgctcatc
gccgaggtgcagggcaccgccgctcggccttaccgcgcaaagatcgacctggcggcaagc
atgcgcacgccccgcagccgcctgcagggagactgctcctgtccggtcggccagaactgc
aaacacatgggcgccacgctgatggtctacctgctggatggggccatcgaagacgatgaa
tggttcccggtaggtgccgggaccgaaggcggactggagcagcccgtgcgcccgcagctg
ctggcggaactgtcgcgctggcaggccatgcgcagccagccggccaagccggtccgcaat
ggcgtggtcttcgagctgtccacggtcaatcatcgcccgtcggtgctgatgcgcaaggtg
aagtaccttggcgacggcggcatcgagttcggcaagtggaccgaaatcaccgccgagatg
ctgctcaccccgcccaattacctgactccggcggacatatcggtcatcgcccagctctgg
gctgagcgccgtgccactacgcctgagccgcgcatcgacatcggcgccacgctggcactg
atcgttgccagcggccatggttgggtcttctgcgggcgggatcgcgtgcccgcacgcgcc
ggcgcgccgcgccagggcatgctgcactgggaggtggacgaggtggatggcgagcttctg
tcgtttccttcgttgcacctggacggcgatgccgagggcctggtactgggcaatgccgcc
ggctacctcgaccccgttaccggcgaggtggggccgctgctgctcgatgtgagcatccag
gatgcggatttctttctctccctgccgcccctgctgcccaccgaagcgccggtggtggcg
caggtactgcagcagatggacccggcactgccgcgccccggttcggttgacgcgatgcgt
acgctgcagatcagcgcgatgacgccggtgctgcgcctgcacagtttcgagtaccgcccg
gcatggatgagccgtcgcgggccctcgcggtgggcggactttgcgaccgttgccttcgaa
tacgacgaacacgtgcgcttcctggatgaccccaacgtgttcgttcacgacgccaacggt
gagctggccctgctgccgcgcgatcctgccgaagaggcgcgccgcgagcgcgaactgcgc
ggcttccacctgcaccgcgatacggcgccccgcgcctcgctggagggcgcaggaccgcag
ttcgtcctgcgcagccaggactggacccggctcatgctgcaggacgtgccgcagctggaa
gcgctcggctggaaagtggaggtggatgacgatttccgccaccgcatcaccctgatcgac
gatatcgatctggacatccagcccagccagacggaagacggctggttcgatctcggcctg
gacatccaggtcgatggccgcaccgtgccgctggctccgctgctgcacacggtgctgcag
accgatccgcgctggctgcgcgggcagatcgatgccatcgatgacgacgagcacgtgatg
ctgtcggccaacgacaacactcatctggcgattcgcgccgcacgcctgaagccggtcatt
gccttgctcgccgatctgttcacccagcgcgatgcccccttgcgggtgtcggcgcgtgac
cgtggccgcctgcgcgccctgcaggacgatgcgcgcctgcggttcaagggccaccaggac
acccgtgcgctggtgcagcggctgatccagactccggcgccaaccgaggtcactcccccg
gccgggctggccgcttccctgcgtccgtaccagctgcagggcctggcctggctgcagtac
ctgcggcagcaggacctcggcggcgtgctggccgacgacatgggcctgggcaagacactg
cagaccctggcccatatcctgctggaaaaggaacagggccggctgcagcagccggcgctg
gtggtggtgtccacctcgctgctgcataactggaccggtgaagcggcccgcttcaccccc
gacctgcgcgtgctggcactgcatggcgccgaccgcgccacccacttcgatcgcatcggc
gaacacgatctggtgctgaccacctacccgctggtgtggcgcgatgaagaggccctgctg
gcccacgactatcacctgctgatcctcgacgaggcacagcaggtcaagaacgcaaaatcg
aaggcggccatcgccctgcgcacgctgcacgcgcgccatcgcctgtgcctgaccggtacg
ccgctggaaaaccacttgggcgagctgtgggcgcagttcgatttcctgctgcccggcctg
ctgggcaacgagaagcagttcaaccagcattggcgccatcccatcgagcgcggcagcgac
ccgcagcgggcgcacctgctcgcccagcgcctgcgcccgttcatgctgcgccggcgcaag
gcccaggtggcggccgagctgccgccgaagtccgagatcacccgcacggtggcgctggaa
ggcgcacagcgcgatctgtatgaaaccgtgcgcgcatcgatggaagccaaggttcgtgaa
gccgtggccgcgcagggcctgagccgcagtcatatcctggtgctggacgccctgctgaaa
ctgcgccaggtctgctgcgacccgcggctgctgcccggtgagaccggcaggcgcagtgcg
ccgtcggccaagctggacctgctgcgcgacatgctgccggagatggtggaagaaggccgg
cgcatcctgctgttctcgcagttcaccagcatgctggcgctgatcgcagaggcactggat
gggatgggcctggcccatgtgcagctgaccggtgatacccaggaccgggccacgccggtg
cagcgcttcatggcgggcgaggtgccgatcttcctgatcagcctgaaggccggtggtgtc
ggcctgaacctcaccgcggcagatacggtcatccacttcgatccctggtggaacccggct
gccgaacgccaggcaaccgatcgcgcccaccgcatcggccagcagcagccggtgttcgtc
tatcggctgatcgccgccggcagcattgaagagcgcatcgccgagctgcagcagcgcaag
gcggcgctggccgattccattcttgaaggtggcaacgccagcggtccgcgcttcaacgat
gaggacctggaagcactgctggcaccgctgccgggggtggtgccgaagggcaagcggggg
cggccggcacgggcctga
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