Stenotrophomonas cyclobalanopsidis: AB1723_18310
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Entry
AB1723_18310 CDS
T10607
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
KO
K02453
general secretion pathway protein D
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc03070
Bacterial secretion system
Brite
Secretion system [BR:
scyc02044
]
Type II secretion system
General secretion pathway protein
AB1723_18310 (gspD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
Secretin_N
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
XCZ87421
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All DBs
Position
4036359..4038572
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AA seq
737 aa
AA seq
DB search
MNLRFLPWSLALTLLVGCATVSGPHVHRSANTPPPQAGAGAADPQVVEGDAAAGTPQAVI
RRGSGTMINREAARAPSPALHSASGGSATFNFEGESVHAVVKAILGDMLGQNYVIAPGVQ
GTVTLATPKPVSPAQALNLLEMVLGWNNARMVYSGGRYNIVAADQALAGTVAPSTAPASS
ARGFEVRVVPLQFISASEMKKVLEPYARPNAIVNVDTGRNVITLGGTRAELENYLHTVEI
FDVDWLSGMSVGVFPIQSGKAEQVASDLEKVFGEDSKTPSAGMFRFLPLENANAVLVITP
QVRYLDQIQQWLDRIDTAGGSARLFSYELRYIKARDLAQRLSEAFASSNNRNNRGSSAGL
APGAMPMQLDSRGGDTFSNTSDGSNNTNGTGTSSSANGGMASTMNLPQRQEGNISVSLDV
EGDTVGVSAVEETNALLVRATPQAWRSIREVIEKLDVMPLQVHIEAQVAEVDLNGDLKYG
VNWFFENAVQGQDFTGSTGGATLPSALGRNIWGSFAGAITGSETGWTFLGKNAAAVVSAL
DQVTNLRLLQTPSIFVRNNAEAQLNVGTKIPINSVSVNTGISDSTYSQVQYLDTGVILKV
RPRITRDGVVFLDIVQEVSSAGAVPSGCDPTKSTCNPPINTRKISTEAALQSGDTIMLAG
LITNSDEDSSKGVPGLSRLPIVGGLFGSKARLNKRSEVIVLLTPTIVRNGQEARTLTDEY
SNRFRAMEPFPTRERKK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcgttttctgccctggtcccttgccctgacgctgctggtcggctgcgccacc
gtgtccggcccgcatgtccatcgcagtgccaacacgccgccaccgcaggccggtgccggc
gccgccgatccgcaggtggtcgaaggtgatgccgccgccgggacgccgcaggcggtgatc
cgccgtggcagcggcaccatgatcaaccgcgaggccgcgcgtgcgccctctccggccctg
cattcggccagcggcggcagcgccaccttcaacttcgaaggtgagtcggtgcatgcggtg
gtcaaggcgattcttggcgacatgctggggcagaactacgtcatcgcgccgggcgtgcag
ggcacggtcaccctggccacgcccaagccggtgtcgccggcgcaggcgctcaacctgctg
gagatggtgctgggctggaacaacgcccgcatggtctacagcggtggccgctacaacatc
gtcgccgccgaccaggcgctggccggcaccgtcgcacccagcaccgcaccggcctccagt
gcccgcggcttcgaagtgcgcgtggtgccgctgcagttcatttccgccagcgagatgaag
aaggtgctggagccgtacgcgcggcccaacgccatcgtcaacgtcgataccggccgcaac
gtgatcacccttgggggtacccgcgccgagctggagaactacctgcacaccgtcgagatc
ttcgacgtcgactggctgtcgggcatgtcggtgggcgtgttcccgatccagtcgggcaag
gccgagcaggtcgccagcgacctggagaaagtgtttggcgaagacagcaagacgcccagc
gccggcatgttccgtttcctgccgctggaaaacgccaatgccgtgctggtgatcaccccg
caggtgcgctacctggaccagatccagcagtggctggaccgcatcgacaccgccggtggc
agcgcgcgcctgttctcctacgagctgcgctacatcaaggcccgcgacctggcccagcgc
ctctccgaagccttcgccagcagcaacaaccgcaacaaccggggctccagcgccgggctg
gcaccgggcgcgatgccgatgcagctggacagccggggtggcgacaccttcagcaacacc
agtgatggcagcaacaacaccaacggtaccggcacctcgtccagcgccaacggcggcatg
gccagcacgatgaacctgccgcagcggcaggaaggcaacatcagcgtcagcctcgatgtg
gaaggtgacaccgtcggcgtctcggcggtggaagaaaccaatgcactgctggtgcgcgcc
acgccgcaggcctggcgctcgatccgcgaagtgatcgagaagctggacgtgatgccgctg
caggtgcatatcgaagcgcaggtggccgaagtcgatctgaacggcgacctgaagtacggc
gtcaactggttcttcgaaaatgccgtgcagggccaggacttcaccggctccaccggcggc
gccaccctgcccagcgcgctgggtcgcaacatctggggcagcttcgccggcgccatcacc
ggcagcgagaccggctggaccttcctcggcaagaacgccgccgcggtggtcagcgcgctg
gaccaggtgaccaacctgcgtctgctgcagaccccgtccatcttcgtgcgcaacaacgcc
gaagcgcagctcaacgtcggcaccaagattccgatcaactcggtatcggtcaacaccggc
atcagcgacagcacctacagccaggtgcagtacctggacacgggcgtgatcctcaaagtg
cgcccgcgcatcacccgtgatggcgtggtgttcctggacatcgtgcaggaagtcagctcg
gccggcgccgtgcccagcggctgcgacccgaccaagtccacctgcaacccgccgatcaac
acccgcaagatttccaccgaggcggccctgcagagcggcgacacgatcatgctggcgggc
ctgatcaccaattccgatgaagacagctccaagggggtgccggggctgagccgtctgccg
atcgtgggtggtctgttcggcagcaaggcacggttgaacaagcgttcggaagtgatcgtt
ctgctgaccccgacgatcgtgcgtaatggacaggaagcgcggacgctgaccgatgagtac
agcaaccgcttccgcgcgatggaaccgttccctacccgcgagcgcaagaagtaa
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