Stenotrophomonas cyclobalanopsidis: AB1723_18380
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Entry
AB1723_18380 CDS
T10607
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc00260
Glycine, serine and threonine metabolism
scyc00460
Cyanoamino acid metabolism
scyc00630
Glyoxylate and dicarboxylate metabolism
scyc00670
One carbon pool by folate
scyc00680
Methane metabolism
scyc01100
Metabolic pathways
scyc01110
Biosynthesis of secondary metabolites
scyc01120
Microbial metabolism in diverse environments
scyc01200
Carbon metabolism
scyc01230
Biosynthesis of amino acids
scyc01240
Biosynthesis of cofactors
scyc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AB1723_18380 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AB1723_18380 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AB1723_18380 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AB1723_18380 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AB1723_18380 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AB1723_18380 (glyA)
Enzymes [BR:
scyc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AB1723_18380 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Glyco_hydro_92
Motif
Other DBs
NCBI-ProteinID:
XCZ87435
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All DBs
Position
4058630..4059883
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AA seq
417 aa
AA seq
DB search
MFPRDVRIETYDPELAKAIAAETQRQEDHVELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRLKQLFGADYANVQPHSGSQANQAVYFALLQPSDTILGMS
LAHGGHLTHGAKVNASGKLFNAVQYGVNDQGLIDYDQVERLALEHKPKMVVAGFSAYSQV
IDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLEHAHVVTSTTHKTLRGPRGGIIV
AKGADEDLIKKLQSVVFPGIQGGPLMHVIAAKAVAFKEALEPGFTAYQQQVVKNAQAMAN
TLIARGYKIVSGGTQNHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAVTTRGYVEQDCVDLANWIADVLDAPTDDAVIARVRDAVSMQCRKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgtgacgtccgcatcgaaacctacgatcccgaactggccaaggccatcgcc
gccgaaacccagcgtcaggaagaccacgtcgagctgatcgccagcgagaactacaccagc
ccggctgtcatggaggcccagggcagccagctgaccaacaagtacgccgaaggctacccg
ggcaagcgctattacggtggctgcgaatacgtggacatcgccgagcagctggcgatcgac
cgcctcaagcagctgttcggcgcggactacgccaacgtgcagccgcacagcggttcgcag
gccaaccaggccgtgtacttcgccctgctgcagccaagtgacaccatcctcggcatgagc
ctggcccacggcggccacctcacccacggtgccaaggtgaatgcttccggcaagctgttc
aacgccgtgcagtacggcgtcaacgaccagggcctgatcgattacgaccaagtcgagcgc
ctggccctggagcacaagccgaagatggtcgtggccggtttctcggcctattcgcaggtg
atcgactgggcgcgcttccgcgccatcgctgacaaggtcggtgcctacctgttcgtcgac
atggcccatgtggccggcctggtcgccgctggcgtctacccgagtccactggaacacgcc
cacgtggtcacctcgaccacccacaagaccctgcgcggcccgcgcggcggcatcatcgtc
gccaagggcgccgacgaagacctgatcaagaagctgcagtcggtggtgtttccgggcatc
cagggcggtccgctgatgcacgtcatcgccgccaaggccgtggccttcaaggaagcgctg
gagccgggcttcaccgcctaccagcagcaggtggtgaagaacgcccaggcgatggccaac
acgctcatcgcgcgtggttacaagatcgtctccggcggcacccagaaccacctgatgctg
gtcgacatgatcggcaaggacgtgtccggcaaggacgcggaagccgcgctgggcaaggct
cacatcaccgtcaacaagaactcggtgccgaacgacccgcgttcgccgttcgtgacctcg
ggcctgcgcctgggcactccggcggtcaccacccgcggttatgtcgaacaggactgcgtg
gacctggccaactggatcgccgacgtgctcgacgccccgaccgatgacgccgtcatcgcc
cgcgtgcgcgacgccgtcagcatgcagtgccgcaagtacccggtctacggttga
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