Streptomyces cyaneofuscatus: R2B67_02440
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Entry
R2B67_02440 CDS
T09646
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scye
Streptomyces cyaneofuscatus
Pathway
scye03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R2B67_02440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scye03400
]
R2B67_02440
Enzymes [BR:
scye01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
R2B67_02440
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
R2B67_02440
DNA repair and recombination proteins [BR:
scye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R2B67_02440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
Zn_ribbon_TFIIB
NFACT_N
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
WOP07465
LinkDB
All DBs
Position
complement(600121..600981)
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AA seq
286 aa
AA seq
DB search
MPELPEVEALRVFLDDHLVGKEIARVLPLAISVLKTYDPPLSALDGTTVTSVARHGKFLD
IEAGGLHLCTHLARAGWLRWKDSFPAAPPRPGKGPLALRLVTVDGDGFDLTEMGTKKSLS
VHLVRDPVDVPGIARLGPDPLADAFDRDTFAGIVGAARRQIKGALRDQTLIAGIGNAYSD
EILHVAKMSPFKRTADLDEDDITRLYTALRTTLKDAVARSSGVEAGKLKSEKKSGMRVHG
RTGEACPVCGDTILEVSFSDSSLQYCPTCQTGGKPLADRRLSKFLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaagtcgaagccctgcgggtcttcctcgacgaccacctggtcggc
aaggagatcgcccgtgtcctcccgctggcgatcagcgtcctgaagacgtacgacccgccg
ctgagcgccctcgacggaaccaccgtcacctcggtggcccgccacggcaagttcctcgac
atcgaggcgggcgggctgcacctctgcacccacctggcacgggcgggctggctccgctgg
aaggactccttcccggccgccccgccgcgccccggcaagggtccgctcgccctgcgcctg
gtgaccgtggacggtgacggcttcgacctcaccgagatggggaccaagaagagcctctcc
gtccacctagtccgcgacccggtggacgtccccggcatcgcccgcctcggccccgacccg
ctcgccgacgccttcgaccgggacaccttcgcgggcatcgtcggcgcggcgcgccgccag
atcaagggcgccctgcgcgaccagacgctcatcgcgggcatcggcaacgcctacagcgac
gagatcctgcacgtggcgaagatgtccccgttcaagcggaccgccgacctcgacgaggac
gacatcacccgcctgtacaccgcgctgcgcaccacgctcaaggacgccgtggcacgctcc
agcggggtggaggccggaaagctcaagtccgagaagaagagcgggatgcgggtccacggg
cgtacgggggaggcctgtccggtctgcggagacaccatcctggaggtctccttcagcgac
tcctcgctccagtactgcccgacctgccagaccggcggcaagccgctggccgaccggcgc
ctgtccaagttcctcaagtag
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integrated database retrieval system
