Streptomyces cyaneofuscatus: R2B67_05430
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Entry
R2B67_05430 CDS
T09646
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
scye
Streptomyces cyaneofuscatus
Pathway
scye03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R2B67_05430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scye03000
]
R2B67_05430
03400 DNA repair and recombination proteins [BR:
scye03400
]
R2B67_05430
Enzymes [BR:
scye01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
R2B67_05430
Transcription factors [BR:
scye03000
]
Prokaryotic type
Helix-turn-helix
AraC family
R2B67_05430
DNA repair and recombination proteins [BR:
scye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R2B67_05430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WOP13644
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All DBs
Position
complement(1307773..1309203)
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AA seq
476 aa
AA seq
DB search
MDERTRYEAVSSRDARFDGAFFFAVVTTGIYCRPSCPAVTPKRANVRFYPTAAAAQAGGF
RACRRCRPDAVPGSAEWNVRADVVGRAMRMIGDGVVDREGVPGLAGRLGYSARQVQRQLN
AELGAGPVALARAQRSHTARVLLQTTGLPVTEIAFAAGFASVRQFNDTIRRIYARTPSAL
RAEAGTGLGGGRATGLRAGIPLRLAHRGPYAAGAVFDLLGEGAVDRVEEMAGEPGRRTYR
RTLRLPYGTGIAALDEGSPGPWLEARIHLTDLRDLTTAVQRLRRLFDLDADPYAVDEALA
TDPRLAPLVAARPGLRSPGAADPEEEAVRALVGRERAAELVERYGKVLDVPCGALTHVFP
EPGVLAAAVTDPALRTLAAALADGELRLDAGADREEAERALGTLPGVDRRTAALIRMRAL
GDPDVDPYGTAGAERWRPWRSYAVRHLETAARQPQISAPSQAPATSRHAKSSTSTA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacggaccaggtacgaggcggtgagcagccgcgacgcacggttcgacggcgcg
ttcttcttcgccgtcgtgaccaccggcatctactgccggccgagctgccccgccgtcacc
cccaaacgcgccaacgtgcgcttctacccgacggcggcggccgcccaggcgggtggcttc
cgggcctgccggcggtgccgccccgacgccgtgcccggctcggccgagtggaacgtccgc
gccgatgtcgtcggccgcgccatgcggatgatcggcgacggggtggtggaccgcgaaggc
gtccccggcctcgccgggcggctcggctacagcgcccggcaggtccagcgccagctcaac
gccgagctgggcgccgggcccgtcgcgctcgcccgcgcccagcgctcccacaccgcccgg
gtgctcctccagaccaccggcctgccggtcaccgagatcgccttcgcggccgggttcgcc
agcgtgcggcagttcaacgacaccatccgccggatctacgcccgcacccccagcgccctg
cgcgcggaggccgggaccgggctcggcgggggccgggccaccgggctgcgggccgggatc
ccgctgcggctcgctcatcggggcccgtacgccgccggtgccgtcttcgacctgctgggg
gagggggccgtggaccgggtcgaggagatggccggggagccggggcgccgcacctaccgg
cgtacgctgcggctgccgtacgggacggggatcgccgccctcgacgagggatcgcccgga
ccgtggctggaggcccggatccacctcaccgacctgcgcgacctgaccaccgccgtacag
cggttgcggcgcctgttcgacctggacgccgatccgtacgccgtcgacgaggccctggcc
accgaccctcggctcgccccgctggtcgccgcccgccccgggctgcgttcgccgggcgcg
gcggacccggaggaggaggccgtacgggcgctggtggggcgggagcgggcggccgagctg
gtcgagcggtacgggaaggtgctggacgtgccgtgcggcgcgctcacccatgtgttcccg
gagccgggcgtgctggccgcggccgtcaccgatcccgccctgcggaccctggccgccgcg
ctcgccgacggggagctgcggctggacgcgggggccgaccgggaggaggcggagcgggcg
ctcggcacgctgcccggggtggaccggcggaccgccgcgctgatccggatgcgggcgctc
ggggatccggatgtcgacccgtacgggacagcgggggccgagcggtggcggccgtggcgt
tcgtacgccgtacgccatctggagacggccgcccgtcagccccagatcagcgcgcccagc
caggcgcccgccaccagcaggcacgcgaagagctccaccagcaccgcgtag
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