Streptomyces cyaneofuscatus: R2B67_07270
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Entry
R2B67_07270 CDS
T09646
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
scye
Streptomyces cyaneofuscatus
Pathway
scye02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scye00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
R2B67_07270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scye03021
]
R2B67_07270
Transcription machinery [BR:
scye03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R2B67_07270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
FAM199X
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-ProteinID:
WOP08375
LinkDB
All DBs
Position
complement(1766677..1768224)
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AA seq
515 aa
AA seq
DB search
MSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILEEEGVTLMVSAAESPKRARKSVAAKSPVKRTATKTVAAKTTVTRTVAATAAPAAESAD
AVADDAVAAAPAKKAAAKKTAAKKTAVKKTAAKKTAAKKSGKQDDELLDGDEAVEEVKAG
KGEEEEGEGENKGFVLSDDDEDDAPAQQVAVAGATADPVKDYLKQIGKVPLLNAEQEVEL
AKRIEAGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGR
GMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMV
EVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDS
EFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIG
KVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgcccgagatcgccgagtccgagtctgtcatg
gcgctcatcgagcgagggaaggctgatgggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaggctgaccagattccgccaacccagtggaagaatgttctgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcggagtcgccgaagcgcgcc
cgcaagagcgtcgcagcgaagagcccggtcaagcgcaccgccaccaagactgtcgcggcg
aagaccaccgtgacgaggaccgtcgcggccaccgccgccccggcggccgagagcgcggac
gcggtggccgacgacgccgtcgcggccgcccccgcgaagaaggcggcagccaagaagacg
gctgccaagaagaccgccgtgaagaagacggcggccaagaagacagcggcgaagaagtcc
ggcaagcaggacgacgaactgctcgacggtgacgaggccgtcgaagaggtcaaggccggc
aagggcgaggaagaggagggcgagggcgagaacaagggcttcgtcctctccgacgacgac
gaggacgacgcgcctgcccagcaggtcgccgtcgccggcgccaccgccgacccggtcaag
gactacctcaagcagatcggcaaggttcccctcctcaacgccgagcaggaggtcgagctc
gccaagcgcatcgaggccggtctcttcgccgaggacaagctggccaacgccgacaagctc
gcgccgaagctcaagcgcgagctggagatcatcgccgaggacggccgccgcgccaagaac
cacctcctggaggccaacctccgtctggtggtctccctggccaagcgctacaccggccgc
ggcatgctcttcctggacctgatccaggagggcaacctcggtctgatccgcgcggtcgag
aagttcgactacaccaagggctacaagttctccacgtacgccacctggtggatccgtcag
gcgatcacccgcgccatggccgaccaggcccgcaccatccgtatcccggtgcacatggtc
gaggtcatcaacaagctcgcgcgtgtgcagcgccagatgctccaggacctgggccgtgag
cccaccccggaggagctggccaaggagctcgacatgacccctgagaaggtcatcgaggtc
cagaagtacggccgcgagccgatctcgctgcacaccccgctcggcgaggacggcgacagc
gagttcggtgacctgatcgaggactccgaggccgtcgtcccggcggacgcggtcagcttc
acgctcctccaggagcagctgcactcggtcctcgacacgctctccgagcgtgaggccggc
gtggtctcgatgcgcttcggtctcaccgacggccagccgaagacgctggacgagatcgga
aaggtctacggcgtgacgcgtgagcgcatccgccagatcgagtcgaagacgatgtcgaag
ctccgccacccgtcgcgttcgcaggttctgcgcgactacctggactag
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