KEGG   Streptomyces cyaneofuscatus: R2B67_07680
Entry
R2B67_07680       CDS       T09646                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
scye  Streptomyces cyaneofuscatus
Pathway
scye03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scye00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    R2B67_07680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scye03019]
    R2B67_07680
Messenger RNA biogenesis [BR:scye03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     R2B67_07680
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: WOP08446
LinkDB
Position
complement(1871005..1872690)
AA seq 561 aa
MSHPHPELGTPPKLPKGALRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFTTIRDRLDDIEGIVLTHGHEDHIGGVPYLLRLKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVTEGQRERIGVFDCEFIAVNHSIPDALAVAIRTPAGMAVATGDFKMDQLP
LDGRLTDLHAFARLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRTVFANAQKRIIVAS
FASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPAGLVVDVKALDDLPD
DEVVLVCTGSQGEPMAALSRMANRDHQIRIVPGDTVILASSLIPGNENAVYRVINGLTRW
GANVVHKGNAKVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKD
HIVIAEDGVVVDLIDGKAKIVGKVQAGYVYVDGLSVGDVTETSLKDRRILGDEGIISVFI
VVDSSSGKIVGGPHIQARGSGIDDSAFTGVTPKIQEALDKSAQDGVMEPHQLQQMVRRVV
GKWVSDTYRRRPMILPVVVEV
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgagccatccgcaccctgaactcggcacccccccgaagctcccgaagggcgccctgcgg
gtcaccccgctcggcggcctgggcgagatcggccgcaacatgacggtcttcgagtacggc
ggccgcctgctcatcgtcgactgcggcgtcctcttccccgaggaggagcagccgggcatc
gacctgatcctgccggacttcaccacgatccgggaccgcctggacgacatcgagggcatc
gtcctcacgcacggccacgaggaccacatcggcggcgtgccctacctcctgcgcctgaag
ccggacatccccctcatcggctcgaagctgaccctcgcgctcatcgaggcgaagctccag
gagcaccgcatccgcccgtacaccctcgaagtcaccgagggccagcgcgagcgcatcggc
gtcttcgactgcgagttcatcgcggtcaaccactcgatcccggacgccctcgcggtcgcc
atccgcacccccgcgggcatggccgtggccaccggtgacttcaagatggaccagctcccg
ctggacggccgtctcaccgacctgcacgcgttcgcgcgtctcagcgaggagggcatcgac
ctcctcctctcggactccacgaacgccgaggtccccggcttcgtaccgcccgagcgggac
atctccaacgtcctgcgcacggtcttcgccaacgcgcagaagcgcatcatcgtggcgagc
ttcgccagccacgtgcaccgcatccagcagatcctggacgccgcccacgagtacggccgc
agggtcgccttcgtcggccgctcgatggtccgcaacatgggcatcgcccgtgacctcgga
tacctgaaggtccccgcgggcctggtcgtcgacgtgaaggccctcgacgacctgccggac
gacgaggtcgtgctggtctgcacgggctcgcagggcgagccgatggccgccctctcccgg
atggccaaccgcgaccaccagatccggatcgtccccggcgacacggtgatcctggcgtcg
tccctcatccccggcaacgagaacgcggtctaccgcgtgatcaacggcctgacccgctgg
ggcgccaacgtcgtccacaagggcaacgccaaggtccacgtctcgggccacgcctcggcc
ggcgagctgctgtacttctacaacatctgcaagccgaagaacctgatgccggtccacggc
gagtggcgccacctgcgggccaacgccgagctgggagccctcacgggcgtgcccaaggac
cacatcgtcatcgccgaggacggcgtggtcgtcgacctgatcgacggcaaggcgaagatc
gtcggcaaggtccaggccggttacgtgtacgtcgacggcctctccgtcggcgacgtcacc
gagacctccctcaaggaccgccgcatcctcggcgacgagggcatcatctcggtcttcatc
gtggtcgacagctcctccggcaagatcgtgggcggcccccacatccaggcccggggctcc
ggcatcgacgacagcgcgttcaccggggtcaccccgaagatccaggaagccctggacaag
tcggcccaggacggcgtcatggagccccaccagctccagcagatggtccgccgcgtcgtc
ggcaagtgggtctccgacacctaccgccggcgcccgatgatcctcccggtcgtcgtcgag
gtctga

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