Streptomyces cyaneofuscatus: R2B67_19795
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Entry
R2B67_19795 CDS
T09646
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scye
Streptomyces cyaneofuscatus
Brite
KEGG Orthology (KO) [BR:
scye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scye03032
]
R2B67_19795 (topA)
03400 DNA repair and recombination proteins [BR:
scye03400
]
R2B67_19795 (topA)
Enzymes [BR:
scye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
R2B67_19795 (topA)
DNA replication proteins [BR:
scye03032
]
Prokaryotic type
DNA Topoisomerases
R2B67_19795 (topA)
DNA repair and recombination proteins [BR:
scye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
R2B67_19795 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WOP10644
LinkDB
All DBs
Position
4479543..4482434
Genome browser
AA seq
963 aa
AA seq
DB search
MSPTSETAQGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPDEYTGE
VRRLGVDVDNDFQPIYVVNADKKAQVRKLKQLLAESDELFLATDEDREGEAIAWHLQEVL
RPKVPVHRMVFHEITKDAIRAAVANPRELNQRMVDAQETRRILDRLYGYEVSPVLWKKVM
PKLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGKFATGRTGDASDPSTLTARLSAVD
GRRIAQGRDFGADGQLKAGSAQTLHLDEVNARALAAALADTSFAVRSVESKPYRRSPYAP
FRTTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSDTAVSAARAQVTQLY
GANYLPEKPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQ
MKDATGNSVTVKIGGRASDGRDAEFSASGKTITFHGFMKAYVEGADDPNAELDDRERRLP
QVAEGDALTADEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVF
KKGTALVPSFLSFAVVNLLEKHFGRLVDYDFTARMEDDLDRIARGEAQSVPWLKRFYFGT
TGSGDDPAGAGAASDAGNGDGDHLGGLKELVTDLGAIDAREISSFPVGNDIKLRVGRYGP
YIERGEKDAEGHQRADVPEDLAPDELTVELAEELLAKPSGDFELGADPVSGNQIIAKDGR
YGPYVTEVLPEGTPKTGKNAVKPRTASLFKSMSLDTVTLADALKLMSLPRVVGEDAEGVE
ITAQNGRYGPYLKKGTDSRSLTSEDQLFDITLEEALAIYAQPKQRGRAAAKPPLKELGTD
PVSGSPVVVKDGRFGAYVTDGETNATLRTGDSVEEITPERGYELLAEKRAKGPAKKKTAK
KAPAKKATAKKTAAKKTTATKTTAAKKTAAKKTTTTKKATAAKKTATVKKTASASASSAS
SED
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcacagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctatctcggccccggatacgtcgtcgaggcgagcgtc
gggcacatccgcgacctcccgaacggcgcggccgaggtcccggacgagtacaccggcgag
gtacgccgcctcggagtggacgtcgacaacgacttccagcccatctatgtggtcaatgcc
gacaagaaggcccaggtcaggaagctcaagcagctgctggccgagtccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaagccatcgcgtggcacctccaggaagtcctg
cggcccaaggtcccggtccaccggatggtcttccacgagatcaccaaggacgcgatccgg
gccgccgtcgccaacccgcgcgagctgaaccagcgcatggtcgacgcccaggagacccgc
cgtatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgaagctctcggcgggccgcgtccagtccgtcgccacccgcctcgtcgtcgagcgggag
cgcgagcgcatcgccttccgctccgccgagtactgggacctgaccgggaagttcgccacc
ggccgtaccggtgacgcctccgacccctcgaccctgaccgcccgcctcagcgcggtcgac
ggccgccgcatcgcccagggccgcgacttcggcgccgacggccaactcaaggccggttcc
gcccagaccctgcacctggacgaggtgaacgcccgcgccctggccgccgcgctcgccgac
acgtccttcgcggtccggtccgtcgagtcgaagccgtaccggcgctccccgtacgccccc
ttccgtacgacgaccctccagcaggaggcgagccgcaagctgggcttcggggcgaaggcg
accatgcaggtggcgcagaagctgtacgagaacggcttcatcacctatatgcgtacggac
tccacgaccctctcggacaccgcggtctccgcggcccgggcccaggtcacgcagttgtac
ggggcgaactacctgcccgagaagccgcgtacgtacgcggggaaggtcaagaacgcgcag
gaggcgcacgaggcgatccgcccctccggcgaccgcttccgcacccctgccgagaccggc
ctcaccggcgaccagttccggctctacgagctgatctggaagcggaccgtcgcctcccag
atgaaggacgcgaccggaaactcggtcaccgtcaagatcggcggccgggcgagcgacggc
cgggacgccgagttctccgcctccggcaagacgatcaccttccacggcttcatgaaggcg
tacgtcgaaggcgccgacgacccgaacgccgagctggacgaccgcgagcgccggctgccg
caggtcgccgagggcgacgcgctgaccgccgacgagatcacggtcgacgggcacgccacc
aagcccccggcccgctacaccgaggcctcgctggtcaaggagctcgaagagcgcgagatc
ggccgcccgtcgacgtacgcctcgatcatcgggaccatcctcgaccgcggctacgtcttc
aagaagggcacggcactcgtcccgtcattcctctccttcgccgtggtcaacctgctggag
aagcacttcggccggctcgtcgactacgacttcaccgcccgcatggaggacgacctcgac
cgcatcgcgcggggcgaggcccagtccgtgccgtggctgaagcgcttctacttcggaacg
accggttccggtgacgacccggccggtgcgggcgccgcctccgacgcgggcaacggcgac
ggcgaccacctcggcggactgaaggaactggtcaccgacctcggcgcgatcgacgcccgg
gagatctcctccttcccggtcggcaacgacatcaagctccgcgtcggccgctacggcccg
tacatcgagcggggagagaaggacgccgagggccaccagcgcgccgacgtgcccgaggac
ctggcgcccgacgagctgaccgtggagctggcggaggagctgctggccaagcccagcggc
gacttcgagctgggcgccgacccggtcagcggcaaccagatcatcgccaaggacgggcgc
tacggcccgtacgtcaccgaggtgctgcccgaggggacgccgaagaccggcaagaacgcg
gtgaaaccgcggaccgcctccctcttcaagtccatgtccctggacacggtcaccctcgcc
gacgccctcaagctgatgtcgctgccgcgcgtcgtcggcgaggacgccgagggtgtcgag
atcaccgcgcagaacggccggtacggcccgtatctcaagaagggcaccgactcccggtcg
ctgacctccgaggaccagctcttcgacatcaccctcgaagaggccctcgcgatctacgcc
cagcccaagcagcgcggccgggccgcggccaagccgccgctgaaggagctgggcaccgac
ccggtgagcggttcgccggtcgtggtgaaggacggccgcttcggcgcgtacgtcaccgac
ggcgagaccaacgccaccctgcggaccggcgacagcgtcgaggagatcacgccggagcgc
ggctacgagctgctcgccgagaagcgcgccaagggacccgccaagaagaagacggcgaag
aaggccccggcgaagaaggcgacggccaagaagacggccgcgaagaagacgacggcgacc
aagaccacggccgccaagaagaccgcggcgaagaagacgacgaccaccaagaaggcgacg
gccgccaagaagacggcgacggtgaagaagacagcttccgcgtcggcttcttctgcctcc
tccgaggactga
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