Streptomyces cyaneofuscatus: R2B67_24485
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Entry
R2B67_24485 CDS
T09646
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
scye
Streptomyces cyaneofuscatus
Pathway
scye03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R2B67_24485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scye03400
]
R2B67_24485
Enzymes [BR:
scye01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
R2B67_24485
DNA repair and recombination proteins [BR:
scye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R2B67_24485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
PhoH
TraI_hel_assoc_N
PIF1
AAA_16
NPHP3_N
UvrD_C
HTH_IclR
DEAD
nSTAND3
Herpes_Helicase
AAA
DUF87
TrwB_AAD_bind
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
WOP11495
LinkDB
All DBs
Position
5569973..5572198
Genome browser
AA seq
741 aa
AA seq
DB search
MSNMAVIEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGALLGAQVGESLRMEGRWG
SHSQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITTHFGVDTLDIIENA
PKRLVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYEDASISVV
KNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSSDQGHCYLPEERL
IADGVKLLQVDTGLVIECLAELAADPEGVVREKVPSPEGGEPITAVYLVPFHRAELSLAG
QVRRLLRTEEDRMPAFQDVDWDKALAWLATRTGASLAPEQEEAVRLALSRKVAVLTGGPG
CGKSFTVRSIVELARAKRAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAYD
RDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLSDLLAE
GSPVPAVRLTRIFRQAQRSGVVTNAHRINAGQPPLTEGLSDFFLFVEDETADAGKLAVDV
AARRIPAKFGLDPRRDVQVLAPMHRGPAGAGELNGLLQQSITPGRPDLPEKRFGGRVFRV
GDKVTQIRNNYDKGENGVFNGTVGVVTGLELDEQRLTVRTDEDEEIGYDFDELDELAHAY
AMTIHRSQGSEYPAVVIPVTNSAWMMLQRNLLYTAVTRAKKLVVLVGSRKAIGQAVRTVS
AGRRCTALDFRLRGGSGEDFS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacatggccgtcatcgaaggggtcctggagcggatcacgtacgccaacgaggag
aacgggtacacggtcgcccgcgtcgacaccgggcgcggggccggggatctcctcacggtg
gtcggtgcgctgctcggcgcgcaggtcggtgagtcgctgcggatggagggccgttggggc
tcgcactcccagtacggcaagcagttcaccgtggagaactacaccaccgtgctgcccgcc
accatccagggcatccgccgctatctaggctccgggctgatcaagggcatcgggccggtg
atggccgaccggatcaccacccatttcggcgtcgacaccctcgacatcatcgagaacgca
ccgaagcggctcgtcgaagttcccggcctcggccccaagcgcacgaagatgatcgcggcg
gcgtgggaggagcagaaggcgatcaaggaggtcatggtcttcctccagggcgtcggcgtc
tccacctcgatcgccgtccgcatctacaagaagtacgaggacgcctcgatctccgtcgtg
aagaaccagccctaccggctggccgccgatgtgtggggcatcgggttcctcaccgccgac
aggatcgcccaggcggtcggcattccgcacgacagccccgagcgggtcaaggccggtctg
cagtacgccctctcccagtcctccgaccaggggcactgctacctccccgaggagcggctc
atcgcggacggggtcaagctcctccaggtcgacacggggctcgtcatcgagtgcctggcc
gagctggcggccgatccggagggtgtcgtacgggagaaggtgccgtcgcccgaggggggt
gagccgatcaccgcggtctatctggtgcctttccatcgggccgagctgtccctcgccggg
caggtgcggcggctgctgcggaccgaggaggaccggatgccggccttccaggacgtggac
tgggacaaggcgctggcctggctcgcgacgcggacgggggcctcgctcgcgcccgagcag
gaggaggccgtacggctggcgctcagccggaaggtggccgtcctgaccggcgggcccggc
tgcgggaagtcgttcaccgtacggtccatcgtcgagctggcgcgggccaagcgggcgaag
gtggtgctggccgcgcccacggggcgggccgccaagcggctggccgagctgacgggggcc
gaggcctccaccgtgcaccggctgctggagctgaagccgggcggggacgccgcgtacgac
cgggaccggccgctcgacgcggatctggtcgtcgtcgacgaggcctcgatgctcgatctg
ctgctcgccaacaagctcgtgaaggccgtggcacccggtgcccacctcctcctcgtgggc
gatgtcgaccagctgccctcggtcggggcgggggaggtgctcagcgacctgctcgcggag
ggcagtcccgtccccgccgtccggctgaccaggatcttccggcaggcccagcggtcgggg
gtggtcaccaacgcgcaccggatcaacgccgggcagccgccgctcaccgaagggctgagc
gacttcttcctcttcgtggaggacgagacggcggacgcgggcaagcttgccgtcgatgtg
gcggctcgccgcattccggccaagttcggtctcgatccgcgccgcgacgtgcaggttctc
gcgccgatgcaccgggggccggcgggtgcgggcgagctgaacgggctgctccagcagtcc
atcacccccggccgccccgacctccccgagaagcggttcggcggccgcgtcttccgggtc
ggcgacaaggtcacccagatccgcaacaactacgacaagggcgagaacggcgtcttcaac
ggcacggtcggcgtcgtcaccggccttgaactggacgaacagcggctcaccgtccgcacc
gacgaggacgaggagatcggctacgacttcgacgagctggacgagctggcccacgcgtac
gccatgacgatccaccgctcccagggcagcgagtatccggccgtcgtcatccccgtcacc
aacagcgcctggatgatgctccagcgcaacctgctctacacggccgtgacgcgggccaag
aagctcgtcgtcctcgtcgggtcccgtaaggcgatcggccaggccgttcgcacggtttcc
gcaggcagacggtgtacggcactggatttccggctccggggcggctcaggagaagacttc
tcgtga
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