Streptomyces cyaneofuscatus: R2B67_29350
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Entry
R2B67_29350 CDS
T09646
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scye
Streptomyces cyaneofuscatus
Pathway
scye03030
DNA replication
scye03430
Mismatch repair
scye03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R2B67_29350
03430 Mismatch repair
R2B67_29350
03440 Homologous recombination
R2B67_29350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scye03032
]
R2B67_29350
03400 DNA repair and recombination proteins [BR:
scye03400
]
R2B67_29350
Enzymes [BR:
scye01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R2B67_29350
DNA replication proteins [BR:
scye03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R2B67_29350
DNA repair and recombination proteins [BR:
scye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R2B67_29350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DNA_pol_A_exo1
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
WOP12405
LinkDB
All DBs
Position
complement(6656078..6657091)
Genome browser
AA seq
337 aa
AA seq
DB search
MTMLDDRQTAAPWPTAYPQGYAVVDVETTGLARDDRIVSAAVYRLDALGNVEDHWYTLVN
PERDPGPVWIHGLTSDVLEGAPLFPEVAAELSARLADRVLVAHNAAFDWSMIAREYARAS
VVAPVEQRLCTIALAKELRLPLPNHKLASLAAHFGVVQQHAHHALDDARVLAEAFRPSLH
AAARGGVRLPLLECRPLTEWSDSPVAPRVGYQPARQPNSWRPSRKRPACPYPNPGRYEKE
KPLKQGMRVAFSGDTSIDRELLEDRAVEAGLHVATSVSRLTSLLVTNDPDAATSKTQKAK
SFGTPILEESAFTHLLRDVAPADGAVLPHQAPPPSSE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatgctcgacgaccgccagacagccgcaccgtggccgaccgcctacccccagggg
tacgcggtcgtcgacgtggagaccaccggcctcgcccgcgacgaccggatagtgtccgcc
gccgtctaccggctcgacgccctgggcaatgtcgaggaccactggtacacgctggtgaat
ccggagcgggaccccggtcccgtctggatccacgggctgacgagcgacgtgctggaaggc
gcgccgctctttcctgaggtcgccgccgagctgtcggcgcggctcgcggaccgagtgctc
gtcgcgcacaacgcggcgttcgactggtcgatgatcgcccgggagtacgcgcgcgcctcg
gtggtcgccccggtcgagcagcggctctgcacgatcgcgctcgccaaggagctgcggctg
ccgctgcccaaccacaagctggcctcgctcgccgcccacttcggcgtcgtacagcagcac
gcccaccacgccctggacgacgcccgggtgctggccgaggcgttccggccgagtcttcac
gcggcggcccggggcggggtgcggctgcctctgctggagtgccggccgctgaccgagtgg
tcggactcccccgtcgccccgcgcgtcgggtatcagcccgcgcggcagccgaacagctgg
cggccctcgcggaagcggccggcctgcccgtatcccaatccggggcggtacgagaaggag
aagcctctcaagcaggggatgcgggtggcgttctccggggacacctcgatcgaccgggag
ctgctggaggaccgggcggtggaggcggggctgcatgtggccacgagcgtgtcgcggctg
accagtctgctggtgaccaacgacccggacgcggcgacgtccaagacgcagaaggcgaag
tcgttcggcacaccgatcctggaggagagcgccttcacccatctgctgcgcgatgtggcg
cccgccgacggggctgtgctgccgcaccaggcgccgccaccgtcatcggagtga
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