Streptomyces cyaneofuscatus: R2B67_33070
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Entry
R2B67_33070 CDS
T09646
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scye
Streptomyces cyaneofuscatus
Brite
KEGG Orthology (KO) [BR:
scye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scye03021
]
R2B67_33070
Transcription machinery [BR:
scye03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R2B67_33070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_23
DUF7343
MarR
NirdL-like_HTH
HTH_37
HTH_28
HTH_24
HTH_5
KORA
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WOP13940
LinkDB
All DBs
Position
7466924..7467787
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AA seq
287 aa
AA seq
DB search
MEATTGVAASAALAPAVLPQIDDPQKIAPKDARSLSALFFQQLQVLEEGTHEYQYARNTL
IEMNLSLVQFAAKRYRNRGDGQMEDIIQVGTIGLIKAIDRFELSREVEFTSFAIPYIVGE
IKRFFRDSTWSVHVPRRLQELRVTLAKAKEELTSTLGHDPGVAELAAHLDISEEEVIDGL
IASNGYTAGSIDLPLGGTEQGASDSGTSYADITGDCDPGMELVENLHALAPLLETLEPRD
REIVRMRFGQEMTQAQIGEHLGISQMHVSRLLSRLLATLREGMLTQN
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacgaccggggtcgccgcgtcggcggcactcgcgcctgcggtactcccgcag
atcgacgatccgcagaagatcgccccgaaggacgcccggtcgctgagcgcgctcttcttc
cagcagttgcaggtcctcgaagaaggcacgcacgagtaccagtacgcgcgcaacaccctc
atcgagatgaacctgtcgttggtccagttcgccgcgaagaggtaccgcaaccgcggcgac
ggccagatggaagacatcatccaggtcggcaccatcggcctgatcaaggcgatcgaccgc
ttcgagctgtcgcgcgaggtcgagttcacctccttcgcgatcccctacatcgtcggtgag
atcaagcgcttcttccgcgactccacgtggtccgtccacgtcccccggcgcctgcaggag
ctgcgggtcaccctggccaaggccaaggaggagctcacctccaccctggggcacgacccc
ggcgtcgcggagctcgccgcgcacctggacatctccgaggaggaggtcatcgacggcctc
atcgcctccaacggctacaccgcgggctccatcgacctcccgctcggcgggaccgagcag
ggcgcctccgacagcggcaccagctacgccgacatcaccggcgactgcgacccgggcatg
gaactggtcgagaacctccacgcactggccccgctcctggagacgctggagccccgcgac
cgcgagatcgtccggatgcgcttcggccaggagatgacccaggcccagatcggcgaacat
ctgggcatctcccagatgcatgtctcccggctgctctcgcggctcctcgccacgttgcgg
gaaggcatgctcacccagaactga
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