Streptomyces cyanogenus: S1361_17965
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Entry
S1361_17965 CDS
T07416
Symbol
ligT
Name
(GenBank) 2'-5'-RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
scyg
Streptomyces cyanogenus
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyg03016
]
S1361_17965 (ligT)
Enzymes [BR:
scyg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
S1361_17965 (ligT)
Transfer RNA biogenesis [BR:
scyg03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
S1361_17965 (ligT)
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
aGPT-Pplase3
SPDY
Motif
Other DBs
NCBI-ProteinID:
QTD99242
UniProt:
A0ABX7TR86
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All DBs
Position
complement(4021991..4022563)
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AA seq
190 aa
AA seq
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MRLFAAVLPPEDIVDELAAEVARLRQLPDAGRLRWTDRPGWHFTLAFYGEVPDDVVPALS
DRLARAAHRSAPFSLALAGGGQFGRGRALWTGAQGDVEALRLLADRAEAAARKAGVPMEE
HRRYKAHLTLARSREAVDVRPYVRLLAEFAGRSWTVADAALVRSRLPTSGVPGEQPRYEV
VERWALGGAG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgccgccgtactgccccccgaggacatcgtcgacgaactcgccgccgag
gtggcccggttgcggcagctgccggacgccggccggctgcgctggaccgaccgccccggc
tggcacttcaccctcgccttctacggcgaggtgcccgacgacgtcgtacccgccctgtcg
gaccggctggcccgcgcggcccaccggtcggcgcccttctccctcgccctcgccggcggc
ggccagttcggccggggccgcgcgctgtggacgggcgcccagggcgacgtggaggcgctg
cggctgctggccgaccgggcggaggcggcggcgcgcaaggcgggggtgccgatggaggag
caccggcggtacaaggcccatctgacgctggcccgcagccgggaggcggtcgatgtacgg
ccgtacgtgcggctgctcgccgagttcgccgggcggagctggaccgtggccgacgcggcg
ctggtgcgcagccggctgccgacgtccggggtgccgggggagcagccgcggtacgaggtg
gtcgagcgctgggcactgggcggggccggttag
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