Streptomyces cyanogenus: S1361_18110
Help
Entry
S1361_18110 CDS
T07416
Name
(GenBank) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
scyg
Streptomyces cyanogenus
Pathway
scyg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
S1361_18110
09124 Replication and repair
03420 Nucleotide excision repair
S1361_18110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scyg03021
]
S1361_18110
03400 DNA repair and recombination proteins [BR:
scyg03400
]
S1361_18110
Enzymes [BR:
scyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
S1361_18110
Transcription machinery [BR:
scyg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
S1361_18110
DNA repair and recombination proteins [BR:
scyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
S1361_18110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
ETAA1
IMD
AAA_22
YflT
Motif
Other DBs
NCBI-ProteinID:
QTD99271
UniProt:
A0ABX7TV05
LinkDB
All DBs
Position
4051693..4053345
Genome browser
AA seq
550 aa
AA seq
DB search
MPRVNGPLIVQSDKTLLLEVDHERADDCRRAIAPFAELERAPEHIHTYRVTPLGLWNARA
AGHDAEQVVDALVQYSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTTTDRPVLEE
VLKSKRIAPLVGARIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELLED
GWALRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTVSARQWK
HELVKRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTRRKGVYPHLELFDSRDWGLIVYD
EVHLLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYI
APADCVEVRVNLTDSERLAYATAETEEKYRFCATTETKRKVTEAIVRRFAGQQILVIGQY
IDQLDELGEHLNAPVIKGETSNAQREKLFDAFRQGEISVLVVSKVANFSIDLPEATVAIQ
VSGTFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTLDQDFAAHRQRFLAEQGYAYRI
VDADEILAES
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgcgtgaatggtccgctgatcgtccagtccgacaagaccctgctcctcgaagtc
gaccacgagcgggccgacgactgccggcgtgccatcgcgcccttcgccgagctggagcgg
gcacccgagcacatccacacctaccgggtcaccccgctcggcctgtggaacgcgcgcgcc
gccgggcacgacgccgagcaggtcgtggacgccctggtgcagtacagccgctacccggtg
ccgcacgcgctgctcgtggacatcgccgagacgatggaccgctacggccgcctcaccctg
tccaagcaccccgcgcacggcctggtcctcaccaccaccgaccggccggtgctggaggag
gtgctgaagtccaagcggatcgcgccgctggtcggcgcccggatcgacccggacaccgtg
gccgtgcacccctccgagcgggggcagatcaagcagacgctgctgaagctgggctggccg
gccgaggacctcgccgggtacgtcgacggtgaggcgcacccgatcgagctgctggaggac
ggctgggcgctcaggccgtaccagaagcaggccgtggagaacttctggcacggcggcagc
ggggtcgtcgtgctgccctgcggtgccgggaagacgctggtcggtgccgggtccatggcc
caggcgaagtcgaccacgctgatcctggtcaccaacaccgtctccgcccggcagtggaag
cacgagctggtgaagcggacctcgctgaccgaggacgagatcggcgagtacagcggcacg
aagaaggagatccggccggtcaccatcgccacctaccaggtgctgacgaccaggcggaag
ggcgtctacccgcacctggagctgttcgactcccgggactggggcctgatcgtctacgac
gaggtgcacctgctgcccgcgccggtgttcaagttcaccgccgacctccaggcgcggcgc
cggctcgggctcacggccaccctcgtgcgcgaggacggccgcgagtcggacgtgttctcc
ctcatcgggcccaagcggttcgacgcgccctggaaggagatcgaggcgcagggctacatc
gcgccagccgactgcgtcgaggtccgggtgaacctcaccgactccgagcggctggcgtac
gccaccgccgagacggaggagaagtaccgcttctgcgcgaccaccgagaccaagcggaag
gtcaccgaggcgatcgtccgccggttcgccgggcagcagatcctcgtcatcgggcagtac
atcgaccagctggacgagctgggcgagcacctgaacgccccggtgatcaagggcgagacc
tccaacgcgcagcgcgagaagctcttcgacgcgttccgccagggcgagatcagcgtgctg
gtggtgtcgaaggtcgccaacttctccatcgacctgcccgaggccaccgtcgccatccag
gtgtccggcaccttcggctcccggcaggaggaggcccagcggctcggccgggtgctgcgc
cccaaggccgacggccaccaggcccacttctactcggtcgtcgcccgcgacaccctcgac
caggacttcgccgcccaccggcagcgcttcctggccgagcaggggtacgcctaccggatc
gtggacgcggacgagatcctggccgagagctag
DBGET
integrated database retrieval system
