Streptomyces cyanogenus: S1361_18220
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Entry
S1361_18220 CDS
T07416
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
scyg
Streptomyces cyanogenus
Pathway
scyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
S1361_18220 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scyg03019
]
S1361_18220 (groL1)
03110 Chaperones and folding catalysts [BR:
scyg03110
]
S1361_18220 (groL1)
03029 Mitochondrial biogenesis [BR:
scyg03029
]
S1361_18220 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scyg04147
]
S1361_18220 (groL1)
Enzymes [BR:
scyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
S1361_18220 (groL1)
Messenger RNA biogenesis [BR:
scyg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
S1361_18220 (groL1)
Chaperones and folding catalysts [BR:
scyg03110
]
Heat shock proteins
HSP60 / Chaperonin
S1361_18220 (groL1)
Mitochondrial biogenesis [BR:
scyg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
S1361_18220 (groL1)
Exosome [BR:
scyg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
S1361_18220 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
S1361_18220 (groL1)
Exosomal proteins of breast cancer cells
S1361_18220 (groL1)
Exosomal proteins of colorectal cancer cells
S1361_18220 (groL1)
Exosomal proteins of bladder cancer cells
S1361_18220 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
CbiA
DUF5021
Motif
Other DBs
NCBI-ProteinID:
QTD99293
LinkDB
All DBs
Position
complement(4074271..4075893)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFATDMERMEAVLEDPYILIANSKISSVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGEVIS
EEVGLKLENATLDLLGRARKVVITKDETTIVDGAGSSEQVNGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SQVFEKLELEGDEATGANAVRIALEAPLKQIAVNAGLEGGVVVEKVRNLTPGHGLNAATG
EYVDLVAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAPAGGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcggcatgaac
cagctcgcggacgccgtgaaggtgacgctcggccccaagggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggtgacggtacgaccaccgcgaccgtgctcgcccaggccctggtcaag
gaaggcctgcgcaacgtcgccgccggtgccaacccgatggccctgaagcgcggtatcgag
aaggccgtcgaggccgtctccgccgccctgctggagcaggcgaaggacgtcgagaccaag
gagcagatcgcctccaccgcgtccatctccgccgccgacacccagatcggcgagctgatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagagcaacacc
ttcggcctggagctcgagctcaccgagggcatgcgcttcgacaagggctacatctccgcc
tacttcgcgaccgacatggagcgcatggaggcggtgctggaggacccgtacatcctcatc
gccaactccaagatctcctcggtcaaggacctgctcccgctcctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggc
gaccgccgcaaggccatgctcggcgacatcgccatcctcaccggcggcgaggtcatctcc
gaggaggtcggcctcaagctggagaacgcgaccctggacctcctgggccgcgcccgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgacggtgccggctcctccgagcaggtc
aacggccgcgtcaaccagatccgcgccgagatcgagaacagcgactccgactacgaccgc
gagaagctccaggagcgcctggcgaagctcgcgggcggcgtggccgtcatcaaggccggt
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctgcaggcc
tcccaggtcttcgagaagctggagctggagggtgacgaggcgaccggcgccaacgccgtg
cgcatcgcgctcgaggccccgctgaagcagatcgccgtcaacgccggcctcgagggcggt
gtcgtggtggagaaggtgcgcaacctgaccccgggccacggcctgaacgccgcgaccggc
gagtacgtcgacctggtcgccgagggcatcatcgacccggcgaaggtgacccgttctgcc
ctgcagaacgccgcctccatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgccgcgccggccggcggcggcatgccgggcggtgacatggacttc
tga
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