Streptomyces cyanogenus: S1361_21780
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Entry
S1361_21780 CDS
T07416
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scyg
Streptomyces cyanogenus
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scyg03032
]
S1361_21780 (topA)
03400 DNA repair and recombination proteins [BR:
scyg03400
]
S1361_21780 (topA)
Enzymes [BR:
scyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
S1361_21780 (topA)
DNA replication proteins [BR:
scyg03032
]
Prokaryotic type
DNA Topoisomerases
S1361_21780 (topA)
DNA repair and recombination proteins [BR:
scyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
S1361_21780 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QTD99982
LinkDB
All DBs
Position
4854507..4857338
Genome browser
AA seq
943 aa
AA seq
DB search
MSPTSETAQGGRRLVIVESPAKAKTIKGYLGPGYIVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVDHDFQPIYVINADKKAQVKKLKDLLKDSDELFLATDEDREGEAIAWHLQEVL
KPKIPVKRMVFHEITKDAIREAVANPRQLNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRAGDSSDPSSLVARLQTVD
GRRVAQGRDFDSVGQLKSANTLHLDEATARALAAALENTRFSVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQIAQKLYENGYITYMRTDSTTLSDTAVTAARAQVTQLYGA
EYLPATPRVYAAKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTAADGRDVEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
SEGDALSAEEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTARMEDDLDRIAAGEAKAVPWLKRFYFGEGT
ATGGAAEAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGNDIVLRVGRYGPYIERGEKD
TEQHQRADIPADLAPDELTVELAEELLAKPSGDFELGTDPATGHTIVAKDGRYGPYVTEI
LPEGTPKTGKNAVKPRTASLFKSMSLDTVTLEDALKLMSLPRVVGTDADGQEITAQNGRY
GPYLKKGTDSRSLQSEDQIFTITLEEAQAIYAQPKQRGRAAAKPPLKELGDDPVSGKPVV
VKDGRFGPYVTDGETNATLRSGDSVETITPERGFELLAEKRAKAPAKKTAKKAAAKKTAP
AKKTAAKKTAAKKTTAAAKKTTAKKTAVKKATASKATASGTED
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcacagggcggtcgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctacctcggccccggctacatcgtcgaggcgagcgtc
gggcacatccgcgaccttcccaacggcgccgcggaggtgccggagaagtacaccggcgag
gtgcgtcgcctcggtgtggacgtcgaccatgacttccagccgatctatgtcatcaacgcg
gacaagaaggcgcaggtcaagaagctcaaggacctgctgaaggactccgacgagctcttc
ctcgccaccgatgaggaccgggagggcgaggcgatcgcctggcacctccaggaggtcctg
aagccgaagatcccggtcaagcgcatggtgttccacgagatcaccaaggacgccatccgc
gaggccgtcgccaacccgcgccagctcaaccagaagctggtcgacgcccaggagacccgc
cgcatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccccggctgtcggccggccgtgtccagtcggtcgccacgcgactcgtcgtcgagcgggaa
cgcgagcgcatcgcgtttcgttctgccgagtactgggacctgacgggcaccttcgcgacc
ggccgcgcgggagattcgtcggacccgtcgtcgctggtcgcccggctccagaccgtcgac
ggcaggcgggtcgcgcagggccgcgacttcgactcggtgggacaactcaagagcgcgaac
accctccacctcgacgaggcgaccgcccgcgccctcgccgccgccctggagaacacccgc
ttctccgtgcggtccgtcgagtccaagccgtaccgccgctcgccgtacgccccgttccgt
acgacgacgctgcagcaggaggccagccgcaagctcggcttcggcgcgaaggcgaccatg
cagatcgcccagaagctgtacgagaacggctacatcacgtacatgcgtacggactccacg
accctgagcgacaccgcggtgaccgcggcccgcgcccaggtcacgcagctgtacggcgcc
gagtacctcccggccaccccgcgcgtctacgccgccaaggtcaagaacgcgcaggaggcc
cacgaggcgatccgtccctcgggtgatcgtttccgcacgcccgcggagaccggcctgacc
ggcgaccagttcaagctgtacgagctgatctggaagcggaccgtcgcctcccagatgaag
gacgcgaccggcaacagcgtcacggtgaagatcggcggtacggccgccgacggccgcgac
gtcgagttcagcgcctccggcaagacgatcaccttccacggcttcctgaaggcctacgtc
gagggtgccgacgacccgaacgccgagctggacgaccgcgagcgccggctgccgcaggtc
tccgagggggacgcgctgtccgccgaggagatcacggtcgacggccacgccaccaagccc
ccggcccgctacaccgaggccagcctggtcaaggagctggaagagcgcgagatcggccgc
ccgtcgacgtacgcgtcgatcatcggcaccatcctcgaccgcggctacgtcttcaagaag
ggcacggcactcgtcccgtccttcctgtccttcgccgtggtgaacctgctcgagaagcac
ttcgggcggctcgtggactacgacttcacggccaggatggaggacgacctcgaccgcatc
gcggccggtgaggccaaggcagtgccgtggctgaagcgcttctacttcggcgagggcacc
gccacgggcggcgcggccgaagccggcaacggcgacggggaccacctcggcggcctcaag
gagctggtgaccgacctgggcgcgatcgacgcgcgcgaggtgtcgtcgttcccggtgggc
aacgacatcgtgctccgcgtcggccgctacggcccgtacatcgagcgcggcgagaaggac
accgagcagcaccagcgcgccgacatcccggccgatctggcgccggacgagctgaccgtc
gagctggccgaggaactgctggccaagcccagcggcgacttcgagctgggcaccgacccg
gccaccggccacacgatcgtcgccaaggacggccgctacggcccgtacgtcacggagatc
ctccccgagggcaccccgaagacgggcaagaacgcggtcaagccgcggacggcctcgctc
ttcaagtccatgtcactcgacacggtgacgctcgaggacgcgctgaagctgatgtcgctg
ccgcgcgtcgtcggcaccgacgccgacggtcaggagatcaccgcgcagaacggccgctac
ggcccctacctgaagaagggcacggactcgcgctcgctgcagtccgaggaccagatcttc
acgatcacgctggaggaggcgcaggcgatctacgcccagccgaagcagcgtggccgggcc
gccgccaagccgccgctgaaggagctgggcgatgacccggtctccggcaagccggtcgtg
gtcaaggacggccgcttcggcccgtacgtcaccgacggcgagacgaacgcgaccctccgc
tccggcgacagcgtcgaaacgatcactccggagcgtggcttcgagctgctcgcggagaag
cgggcgaaggctcccgccaagaagaccgcgaagaaggcggcggccaagaagaccgcgccg
gcgaagaagaccgccgcgaagaagacggctgccaagaagacgacggctgccgcgaagaag
acgaccgccaagaagaccgccgtgaagaaggcgacggcttccaaggcgacggcttcgggc
acggaggactga
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