Streptomyces cyanogenus: S1361_23335
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Entry
S1361_23335 CDS
T07416
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
scyg
Streptomyces cyanogenus
Pathway
scyg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
S1361_23335 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scyg03021
]
S1361_23335 (rpoB)
03400 DNA repair and recombination proteins [BR:
scyg03400
]
S1361_23335 (rpoB)
Enzymes [BR:
scyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
S1361_23335 (rpoB)
Transcription machinery [BR:
scyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
S1361_23335 (rpoB)
DNA repair and recombination proteins [BR:
scyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
S1361_23335 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QTE00284
UniProt:
A0ABX7TWR0
LinkDB
All DBs
Position
5173120..5176605
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRTASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNTAWQTRVEE
ALENGQDVPTKSGLEEIFEEISSIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GDYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGTDTPLDAGILTVEDIIATIKYLVKLHAGETETTGDNGETVVVETDDIDHFG
NRRLRSVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFVETPYRKVIDGQVTDEVDYLTADEEDRFVIAQANAPLTSDLRF
EESRVLVRRRGGEVDYVGPEDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSEAPLVGTGMEYRSAVDAGDVVKAEKAGVVQEVSADYITTANDDGTYITYRLAK
FARSNQGTSVNQKVIVNEGDRVVEGQVLADGPATQNGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVIAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLADEWAQRLQAIGADQVAPGTNVATP
VFDGAREDELAGLLQHTIPNRDGERMVLPTGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcactgcctcgaccgcgaatacgaacaacggcgccagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaacctgcttgcgctg
cagaccgagagctttgactggctgctcggcaacaccgcctggcagactcgggtcgaggag
gctctggagaacggtcaggacgtccccaccaagtccggtctggaggagatcttcgaggag
atctcctcgatcgaggacttctccgggtcgatgtcgctgacgttccgggaccaccgcttc
gagccgccgaagaactcgatcgacgagtgcaaggagcgcgacttcacgtacgccgccccg
ctcttcgtcaccgccgagttcaccaacaacgagactggcgagatcaagtcccagaccgtc
ttcatgggcgacttcccgctcatgacgaacaagggcactttcgtcatcaacggcaccgag
cgtgtcgtggtgtcgcagctggtccgttcccccggtgtctacttcgattccagcatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgtatcgaccgcaagcgcaagcag
tcggtcaccgtgctgctgaaggcgctcggctggacgaccgagcagatccttgaggagttc
ggcgactacgagtcgatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgcccgggcgagccccccacgcgtgaggccgcg
cagacgctgctggagaacctctacttcaaccccaagcgctacgacctcgccaaggtcggc
cgttacaaggtcaacaagaagctgggtacggacaccccgctggacgcgggcatcctgacc
gtcgaggacatcatcgcgacgatcaagtacctggtgaagctgcacgccggcgagaccgag
accaccggtgacaacggcgagacggtcgtcgtcgagacggacgacatcgaccacttcggc
aaccgtcgtctgcgcagcgtcggcgagctcatccagaaccaggtccgtacgggtctggcg
cgtatggagcgtgtcgtccgcgagcggatgacgacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcccagttcatggaccagaacaacccgctgtcgggtctcacccacaagcgccgt
ctgtcggctcttggcccgggtggtctctcccgtgagcgggccggcttcgaggtccgtgac
gtgcacccgtcgcactacggccgtatgtgcccgatcgagacgccggaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacggccgggtcaacgcgttcggtttcgtcgagacc
ccgtaccgcaaggtcatcgacggccaggtcaccgacgaggtggactacctgaccgccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgcgccgctgaccagcgacctccgtttc
gaggagagccgcgtgctcgtccgccgtcgtggcggcgaggtcgactacgtcggccccgag
gacgtggactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
ccgttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgccag
gccgttccgctgattaagtcggaggccccgctcgtcggcaccggcatggagtaccgctcc
gccgtcgacgccggcgacgtcgtcaaggccgagaaggccggtgtggtccaggaggtctcc
gcggactacatcaccacggccaacgacgacggcacgtacatcacgtaccgcctggccaag
ttcgcccgctccaaccagggcacctcggtcaaccagaaggtcatcgtcaacgagggcgac
cgtgtcgtcgagggccaggtcctcgccgacggcccggccacccagaacggcgagatggcc
ctcggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcatcgccggtgacatcctcgtcggcaaggtcaccccgaagggtgagaccgagctg
acccccgaggagcgcctgctgcgcgccatcttcggtgagaaggcccgtgaggtccgtgac
acctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggcgtgcgcgtcttcgac
cgcgaggagggcgacgagctgccgccgggcgtgaaccagctggtccgcgtctacgtcgcg
cagaagcgcaagatcaccgacggtgacaagctcgccggccgtcacggcaacaagggtgtc
atctccaagatcctgccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctgggtgtgccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggtctcgccgacgagtgggcc
cagcgcctgcaggccatcggcgccgaccaggtcgcccccggcaccaacgtcgccaccccg
gtcttcgacggtgcccgtgaggacgagctggcgggtctgctgcagcacaccatcccgaac
cgggacggcgagcgcatggtgctcccgaccggtaaggcgcggctgttcgacggccgtagc
ggtgagccgttcccggacccgatctcggtcggctacatgtacatcctcaagctgcaccac
ctggtcgacgacaagctgcacgcccgctcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggcccagttcggtggccagcggttcggtgagatggaggtgtgggcg
ctggaggcgtacggcgccgcgtacgccctccaggagctgctgaccatcaagtccgacgac
gtcaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccctgagccc
ggcattcccgagtccttcaaggtgctcatcaaggaaatgcagtccctgtgcctcaacgtg
gaggtgctgtcctcggacggcatgtccatcgagatgcgcgacaccgacgaggacgtcttc
cgcgctgcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
DBGET
integrated database retrieval system
