Streptomyces cyanogenus: S1361_23945
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Entry
S1361_23945 CDS
T07416
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scyg
Streptomyces cyanogenus
Pathway
scyg03420
Nucleotide excision repair
scyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
S1361_23945 (uvrD2)
03430 Mismatch repair
S1361_23945 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyg03400
]
S1361_23945 (uvrD2)
Enzymes [BR:
scyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
S1361_23945 (uvrD2)
DNA repair and recombination proteins [BR:
scyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
S1361_23945 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
S1361_23945 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QTE00405
LinkDB
All DBs
Position
5300298..5302784
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AA seq
828 aa
AA seq
DB search
MSSLFDDSFLADLQAPRGHEEPPPPPEDDHAPEPLPDDLFGGKFDVPPDRDTHYRDGAPR
PALDSAALLEGLNENQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAYLLAERGVHPGQIL
AITFTNKAAGEMKERVEQLVGPRAHAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAAD
SKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYALY
QSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVRELV
GTGDRAAEEAGTPPGEYDIPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILL
EQNYRSTQTILSAANAVIERNESRRPKNLWTNAGQGARITGYVADTEHDEAQFVADEIDR
LVDAGDARAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVL
ANPEDSVPLRRILNVPKRGIGERAEAMVDALAQREKISFPQALKRVDEAYGMAARSTNAV
KRFNTLMEDLRTIVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVAL
EFEQERGEGEQGTLADFLEQVALVADSDQIPDEEDGDGVITLMTLHTAKGLEFPVVFLTG
MEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSAMRSAWGQPSYNPPSRFLE
EIPATHVEWKRTGATAPVSSGPASGIAASLSSSRSRSSASGASGFATRRTGEKPVVALAV
GDRVTHDQFGLGTVVAVKGTGGNAEATIDFGDAKPKRLLLRYAPVEKL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctccaggcccctcgcgggcacgag
gagcccccgccgccgcccgaggacgatcacgctccggagccgctcccggacgatctgttc
ggcgggaagttcgacgtgccgccggaccgggacacccactaccgcgacggcgccccgcgc
cccgcgctcgactcggcggcactcctggaggggctgaacgagaaccagcgcgccgcggtc
gtgcacgccggctccccgctgctcatcgtcgccggcgccggctcgggcaagacccgcgtg
ctgacccaccgcatcgcgtacctgctcgccgagcggggcgtccacccgggccagatcctc
gcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctcgtc
ggcccccgcgcgcacgcgatgtgggtgatgaccttccacagcgcgtgcgtgcgcatcctg
cgccgcgagagcaagaagctcggcttcacctcgtccttctcgatctacgacgccgccgac
tccaagcgcctgatggccctggtctgccgggacctggacctcgaccccaagcgcttcccg
cccaagtcgttcagcgccaagatcagcaacctgaagaacgagctgatcgacgaggaggac
ttcgccgcccaggccgccgacggcttcgagaagaccctcgcccaggcctacgcgctctac
cagtcgcggctgcgcgaggcgaacgcgctcgacttcgacgacctgatcatgacgacggtc
aacctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcacgtc
ctggtggacgagtaccaggacaccaaccacgcgcagtacgcgctcgtgcgggaactcgtc
ggcacgggggaccgcgccgcagaggaggccggcaccccgcccggcgagtacgacatcccg
cccgccgaactctgcgtcgtgggtgacgcggaccagtcgatctacgccttccggggcgcg
acgatccgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctg
gagcagaactaccgctccacgcagaccatcctgtccgccgccaacgcggtcatcgagcgc
aacgagtcccgccgcccgaagaacctgtggaccaacgccggccagggcgcccggatcacc
gggtacgtcgccgacaccgagcacgacgaggcacagttcgtcgcggacgagatagaccgc
ctggtcgacgcgggtgacgcacgcgcgggagacgtcgccgtcttctaccgcaccaacgcc
cagtcgcgtgtcttcgaagaggtcttcatccgcgtcggcctgccctacaaggtcgtcggc
ggggtccgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgcgtcctc
gccaaccccgaggactcggtgccgctgcgccgcatcctcaacgtgcccaagcggggcatc
ggcgagcgcgcggaggcgatggtcgacgccctcgcccagcgcgagaagatcagcttcccg
caggccctgaagcgcgtggacgaggcgtacggcatggccgcgcgctccaccaacgccgtc
aagcggttcaacacgctgatggaggacctgcgtacgatcgtggagtccggcgccggaccg
gccaccgtcctcgaagcggtcctcgaacgcaccggctacctggcagagttgcaggcgtcc
accgacccgcaggacgagacccggatcgagaacctccaggaactcgcggccgtcgccctg
gagttcgagcaggagcgcggcgagggcgagcagggcacgctcgccgacttcctggagcag
gtcgccctggtcgccgactccgaccagatccccgacgaggaggacggcgacggcgtcatc
acgctgatgaccctgcacaccgccaagggcctggagttcccggtcgtgttcctgaccggc
atggaggacggcgtcttcccgcacatgcgcgccctcggccagaccaaggagctggaggag
gagcgccgcctggcgtacgtcggcatcacgcgcgcgcgggagcggctgtatctcacgcgg
tcggcgatgcgcagcgcctggggccagccgtcgtacaacccgccctcccgcttcctggag
gagatcccggccacccacgtggagtggaagcggacgggggcgacggcgccggtgtcctcc
ggaccggcgtccgggatcgcggcctcgctgtcgtccagccgttcgcgctcctcggcgtcg
ggtgcgtccgggttcgccacgcggcgcacgggggagaagccggtggtagcactggccgtc
ggggaccgggtcacgcacgaccagttcgggctcggcacggtcgtcgcggtgaagggcacg
ggtgggaacgcggaggcgacgatcgacttcggcgacgccaagccgaagcggctcctgctg
cggtacgcgccggtggagaagctgtag
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