Streptomyces cyanogenus: S1361_25675
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Entry
S1361_25675 CDS
T07416
Symbol
pcrA2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scyg
Streptomyces cyanogenus
Pathway
scyg03420
Nucleotide excision repair
scyg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
S1361_25675 (pcrA2)
03430 Mismatch repair
S1361_25675 (pcrA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyg03400
]
S1361_25675 (pcrA2)
Enzymes [BR:
scyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
S1361_25675 (pcrA2)
DNA repair and recombination proteins [BR:
scyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
S1361_25675 (pcrA2)
MMR (mismatch excision repair)
Other MMR factors
S1361_25675 (pcrA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QTE00749
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All DBs
Position
5686248..5689790
Genome browser
AA seq
1180 aa
AA seq
DB search
MSARITDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQILGLTFTNKAAGELAERVRKALIKAGVTDPDVIDPDNPPGEPVISTYHAFAGRLL
TDHGLRIGLEPSSRLLADATRYQLAARVLREAPGPYPALTRSFADLVSDLLTLDSELAEH
LVDPEELRAWDAGLQHTLEDTKLTNADLRKVPETAAARRELADLVQRYRAAKRQRDLLDF
GDQIALSARLARIPEVGRLLREEFRVVLLDEYQDTSVAQRVLLAGLFGGGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPDHFAHADGRPATRQALSENRRSGGRLLDLANGLAAPLRAM
HAGVEALRPAPGAEYDGTVRCALLPTHAEEIDWIADSLAHLVRTGTPPGEIAVLCRTATD
FAEIQGALVARDIPVEVVGLSGLLHLPEIADLVAVCEVLQDPGANASLVRLLTGPRWRIG
PRDLALLGRRARLLVAHARVDDGDDPDRRLAEAVEGVDPSEVISLADALDTFLETPLEDG
DDDGLPFSPDARVRFARLAAELRDLRRSLSDPLMDVLHRVLAVTGLEVELSASPHALAAR
RRETLSNFLDIAASFAASDGEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHKS
KGLEWDVVAVPGLVTGTFPSAQGREKWTAQAKVLPHALRGDTDTLPDVDSWDARGMKAFH
EAMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRGPSDFLQALHDHCAAGHGE
IEAWADEPAEDEENPALHTAGAEQVWPLPLDAAALARRRAAAETVLAHLDSLAARPAGHR
PALHDPAGDEHPDWPAPPDDDPYEEPYPDPYDEEPHEDIPYEDHPYDASPHDEDAPGEVP
PADAPGTAPYAPADRDSWNAGRPLVPHQAPAPRHRPEPHPAPAALTPEEVRTVASWDRDL
DALTGELLRARRTVTDVPLPATLTASQLLRLAEDPDGLAQELARPMPRPPQPAARRGTRF
HAWVEARFEELTLPLLEPDELPGRDAEIADERDLETLKEAFERTEYARRTPYRVEAPFQL
TLAGRVVRGRIDAVYRHGDGDGTTYEIIDWKTGRTRTADPLQLAVYRLAWAEQQGIPPES
VTAAFLYVRTGEVVRPEGLPDRAALERLLTGETESTQQAT
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccgtatcaccgaccccgagcagctcaaggagctcctcggcatcccgttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggcgcc
gggtcgggcaagaccaccgtcatggcggcccgcgtggtctggctggtcggcaccggccag
gtcgcccccgaacagatcctcggcctgaccttcaccaacaaggccgccggcgagctggcc
gaacgcgtccgcaaggcactgatcaaggccggcgtcaccgaccccgacgtcatcgacccc
gacaacccgccgggcgagcccgtcatctcgacgtaccacgccttcgccggccgcctgctc
accgaccacggcctgcgcatcggcctggaacccagctcgcgactgctggccgacgccacc
cgctaccagctcgccgcgcgcgtgctgcgcgaggcccccggcccgtatccggcactgacc
cgctccttcgccgacctggtcagcgacctgctcaccctcgactccgaactcgccgagcac
ctcgtcgaccccgaggaactgcgcgcctgggacgccggcctgcagcacaccctcgaagac
accaagctgaccaacgccgacctgcgcaaggtccccgagacggccgcggcccgccgggaa
ctcgccgacctcgtccagcgctaccgggccgccaagcgccagcgcgacctgctggacttc
ggcgaccagatcgccctgtccgcccgcctcgcccgcatccccgaagtgggccgcctgctg
cgcgaggagttccgcgtggtcctcctggacgagtaccaggacacgtccgtggcccagcgc
gtcctgctcgcgggcctattcggcggcggcaccggccatccggtgaccgccgtcggcgat
ccctgccaggccatctacggctggcgcggcgcctccgtcgccaacctggacgacttcccc
gaccacttcgcccacgccgacggccggcccgccacccggcaggcactgagcgagaaccgg
cgcagcggcggacgcctgctcgacctcgccaacggcctcgccgcgccgctgcgcgccatg
cacgcgggcgtggaggccctccgcccggcccccggcgccgagtacgacggcacggtccgc
tgcgcgctgctgcccacccacgccgaggagatcgactggatcgccgactccctcgcccac
ctcgtgcgcaccggcacaccacccggcgagatcgccgtcctgtgccgcaccgccaccgac
ttcgccgagatccagggcgcactcgtcgcccgcgacatccccgtcgaggtggtcggcctc
tccgggctgctgcacctgcccgagatcgccgacctcgtcgccgtctgcgaggtcctgcag
gaccccggcgccaacgcctccctggtgcgcctgctgaccggaccgcgctggcgcatcggc
ccccgcgacctcgccctgctcggccgccgggcccgcctgctcgtcgcccacgcgcgcgtg
gacgacggcgacgacccggaccgccggctcgccgaagcggtcgagggcgtcgacccctcc
gaggtgatctccctcgcggacgccctggacaccttcctcgaaacacccctggaggacggt
gacgacgacgggctgccgttctcgccggacgcccgcgtgcgcttcgcccggctcgccgcc
gaactgcgcgacctgcgccgctcgctgtccgacccgctgatggacgtcctgcaccgcgtc
ctcgccgtcaccggcctcgaggtggagctgtcggcgtccccgcacgcgctcgccgcccgc
cgccgcgagacgctgtccaacttcctggacatcgccgcctccttcgccgcgagcgacggc
gaggccaccctgctcgccttcctcggcttcctgcgcaccgccgcccagtacgagaagggc
ctcgacaacgccctgcccggcggcgagaacaccgtcaaggtgctcaccgcccacaagtcc
aagggcctggaatgggacgtcgtggccgtccccggactggtcaccggcaccttccccagc
gcccagggccgcgagaagtggaccgcccaggccaaggtgctgccgcacgccctgcgcggc
gacaccgacaccctgcccgacgtcgacagctgggacgcgcgcggcatgaaggccttccac
gaggccatgaaggaccaccagcacaccgaggagctccgcctcggctacgtcaccttcacc
cgcccccgctcgctcctgctcggctccggccactggtggggacccagccagaagaagccg
cgcggcccctccgacttcctccaggccctccacgaccactgcgccgccgggcacggggag
atcgaggcatgggcggacgagcccgccgaggacgaggagaacccggccctgcacacggcc
ggcgccgagcaggtgtggccgctcccgctggacgccgccgccctggcccgccgccgtgcc
gccgccgagaccgtcctcgcccacctggactccctcgccgcccggcccgccggccaccgc
ccggccctgcacgaccccgccggcgacgagcacccggactggcccgcgccaccggacgac
gacccgtacgaggagccgtaccccgacccgtacgacgaggagccgcacgaggacatcccc
tacgaggaccatccctacgacgcctccccccacgacgaggacgcacccggagaggtgccc
ccggccgacgcacccggcaccgccccgtacgcccccgccgaccgggactcctggaacgcc
gggcggcccctggtcccgcaccaggcgcccgccccgcgacaccgccccgagccgcacccc
gcccccgccgcgctcacccccgaggaggtgcgcaccgtcgcctcctgggaccgcgacctg
gacgcgctcaccggagagctgctgcgcgcccggcgcaccgtcaccgacgtccccctgccg
gccaccctcaccgcgtcccagctgctacggctcgccgaggaccccgatgggctcgcacag
gaactcgcgcgccccatgccgcgccccccgcaaccggccgcacgccggggcacccggttc
cacgcgtgggtggaagcccgcttcgaggagctgacgctgcccctgctggaaccggacgag
ctgcccggccgagacgccgagatcgccgacgaacgcgacctggaaaccctgaaagaagcc
ttcgaacgcaccgagtacgcccggcgcaccccgtaccgggtcgaggcccccttccagctc
accctcgccggccgagtcgtccggggccgcatcgacgccgtctacagacacggcgacggc
gacgggacgacgtacgagatcatcgactggaagaccggccgcacccgcaccgctgacccg
ctccagctcgccgtgtaccggctcgcctgggccgagcagcagggcataccgcccgagtcg
gtcacggccgccttcctgtacgtacgcaccggcgaggtcgtacgccccgagggcctgccg
gaccgggccgcactggaacgactcctcaccggtgagacggagagcacacaacaggcgacc
tga
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