Streptomyces cyanogenus: S1361_27645
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Entry
S1361_27645 CDS
T07416
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
scyg
Streptomyces cyanogenus
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scyg03032
]
S1361_27645 (ihfB)
03036 Chromosome and associated proteins [BR:
scyg03036
]
S1361_27645 (ihfB)
03400 DNA repair and recombination proteins [BR:
scyg03400
]
S1361_27645 (ihfB)
DNA replication proteins [BR:
scyg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
S1361_27645 (ihfB)
Chromosome and associated proteins [BR:
scyg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
S1361_27645 (ihfB)
DNA repair and recombination proteins [BR:
scyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
S1361_27645 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
QTE01133
LinkDB
All DBs
Position
6112244..6112906
Genome browser
AA seq
220 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAADAVDHVLDAIVRAVVAGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLSGAPPTIAKA
VGKKAAAKKTAAAAKKTTAKKAAPAKKTTATAKKTTAKKAPAAKKTTTATAKTAATKTAA
KKTTAKKAPAKKVTAKKAPAKKSTARKTTAKKTTARKATS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtgggtggccgccagcaggcc
gccgacgctgtcgatcatgtcctggacgccatcgtccgcgcggtcgtcgcgggcgagcgg
gtctcggtcaccggcttcgggtccttcgagaaggtggaccgccccgcccgctacgcccgc
aatcctcagacgggcgagcgggttcgggtcaagaagacctccgtgccgcgattccgcgcc
ggtcagggcttcaaggacctggtgagcggctcgaagaagctgccgcgcggcggcgaggtc
gccgtcaagaaggcgcccaagggcagcctgtccggcgcgccgcccaccatcgccaaggcc
gtcggcaagaaggccgccgcgaagaagacggccgctgcggccaagaagaccaccgcgaag
aaggcggcgccggcgaagaagaccacggccaccgccaagaagaccacggcgaagaaggcg
cccgccgccaagaagaccaccacggcgaccgccaagaccgccgcgacgaagaccgccgcc
aagaagacgacggcgaagaaggccccggcgaagaaggtgaccgccaagaaggccccggcg
aagaagtcgacggcccgcaagaccaccgccaagaagaccaccgcccgcaaggcgacgtcg
tag
DBGET
integrated database retrieval system
