Streptomyces cyanogenus: S1361_30160
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Entry
S1361_30160 CDS
T07416
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
scyg
Streptomyces cyanogenus
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyg03016
]
S1361_30160 (rnd)
Enzymes [BR:
scyg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
S1361_30160 (rnd)
Transfer RNA biogenesis [BR:
scyg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
S1361_30160 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QTE01632
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All DBs
Position
complement(6722519..6723733)
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AA seq
404 aa
AA seq
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MGAPTPLLEPREGIPPVIADEAALARVIAAFAAGSGPVAVDAERASGYRYGQRAYLVQLR
REGAGTALIDPVACPDLSGLGEALSGVEWVLHAATQDLPCLREIGMVPSRLFDTELAGRL
AGFPRVGLGAMVEGVLGFVLEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKEL
DRQGKLEWALQEFDAIASAPPAEPRKDPWRRTSGMHKVRRRRQLAVVRELWETRDRIAQR
RDVSPGKVLSDAAIVEAALALPGNVHALAALNGFGHRTGRRQLEQWQAAVDRAKALPDSA
LPQPGQPVTGPPPPRAWADKDPAAAARLSAARAGVTALAERLNMPQENVISPDTVRRVCW
EPPKTVDARSVELALAGYGARPWQVELVTPVLVDALSAKGAQTP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgccgactcctctgctcgaaccgcgcgagggcattccgcccgtgatcgccgac
gaggcggccctcgcccgggtgatcgccgccttcgccgccggctccggcccggtcgccgtg
gacgccgagcgcgcctccggctaccgctacggccagcgcgcctacctggtgcagctgcgc
cgcgagggcgccggcaccgccctgatcgacccggtcgcctgccccgacctgtccggactc
ggcgaggccctgtccggcgtcgagtgggtgctgcacgcggccacccaggacctgccctgc
ctgcgcgagataggcatggtcccgagccgcctgttcgacaccgagctggccggccggctc
gccgggttcccccgggtcggcctcggcgccatggtggagggcgtcctcggcttcgtcctg
gagaagggccactccgccgtcgactggtcgacccggccgctgcccgagccctggctgcgc
tacgcggcgctcgacgtcgagctgctggtcgacctgcgggacgccctggagaaggagctg
gaccggcagggcaagctggagtgggcgctccaggagttcgacgcgatcgcgtccgcgccg
ccggccgagccgcgcaaggacccctggcgccgtacgtccgggatgcacaaggtgcgccgg
cgccggcagctcgcggtcgtgcgcgagctgtgggagacgcgggaccggatcgcacagcgc
cgggacgtgtcgccggggaaggtgctgagcgacgcggccatcgtggaggccgcgctggcc
ctgccgggcaacgtccacgccctcgccgcactcaacggcttcgggcaccggacggggcgg
cggcagctggagcagtggcaggccgccgtcgaccgggccaaggcccttcccgacagtgcg
ctgccgcagcctgggcagccggtgaccggtccgccgccgccgcgtgcctgggccgacaag
gatccggccgccgcggctcggctgtccgccgcccgggccggggtgacggcgctggccgag
cggctcaacatgccccaggagaacgtgatctccccggacacggtgcggcgggtctgctgg
gagccgccgaagaccgtcgacgcccggtccgtggagctcgcgctcgccgggtacggcgcg
cggccgtggcaggtggagctggtcacgccggtgctggtggacgcgctgtcggcgaagggt
gcccagacgccgtag
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