Streptomyces cyanogenus: S1361_32145
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Entry
S1361_32145 CDS
T07416
Symbol
recQ3
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
scyg
Streptomyces cyanogenus
Pathway
scyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
S1361_32145 (recQ3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scyg03019
]
S1361_32145 (recQ3)
03400 DNA repair and recombination proteins [BR:
scyg03400
]
S1361_32145 (recQ3)
Enzymes [BR:
scyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
S1361_32145 (recQ3)
Messenger RNA biogenesis [BR:
scyg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
S1361_32145 (recQ3)
DNA repair and recombination proteins [BR:
scyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
S1361_32145 (recQ3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
DUF3553
MarR_2
ResIII
PcrA_UvrD_tudor
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QTE02028
LinkDB
All DBs
Position
7175835..7177541
Genome browser
AA seq
568 aa
AA seq
DB search
MTGEGPPARRRWAGRLRETAAEVFGWTELRPEQLTAMEWVLEGRDCLVVMPTGSGKSAVY
QVPALLLSGPVVVVSPLLALQRDQIAGLPGGDRGPGAVAVNSDLGAAETEEAWAAVREGS
VRYVYLSPEQLAKDEVVQRLTEAHPALVVVDEAQCVSSWGHDFRPDYLRLAQAVRRLGRP
PVLALTATAAPPVRQDIVERLGMERPRRLVTGFDRPGIRLEAHRHLEDDERRSRVLEDAA
AAPKPGIVYAATRKDSESYAAELASLGLAAGAYHAGLRAAERRRIHEAFLSGDLDVVVAT
SAFGMGIDKENVRFVLHASLPGSLDAYYQEIGRCGRDGRPALAVLHYRTEDTGMQAYFSS
RTPRPEAVDAVVRAVHAHRDDPPDVTGLRRETDLSRARVTTAVNLLEEAGALVTDASGAI
RPVPGTAPSRAVRRAVDTAEAHKRMDRSRVDMARAYAETTGCRRRFLLGYFGEEYEAPCG
NCDMCDEQESGDDDATSTGRHPDSGAYPPGAAVRHGEWGRGTVLSEDGDRITVLFDEVGY
RTLSLDALAARDDLLTVVGGSQDSRPEP
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaccggggaaggaccccccgcccgcagacggtgggccgggcggctgcgcgagacggcc
gccgaggtgttcggctggacggagctgcgtcccgaacagctcaccgccatggagtgggtg
ctggagggacgggactgtctcgtcgtcatgccgaccggatcgggcaagtccgccgtgtac
caggtccccgccctgctgctgtccgggccggtcgtcgtcgtgtcaccgctgctggccctg
cagcgcgaccagatcgcgggactgcccggcggcgaccgcggcccgggcgctgtcgccgtg
aactccgacctcggcgcggccgagaccgaggaggcctgggcggcggtgcgcgagggttcg
gtgcgctacgtctacctgtccccggagcaactggccaaggacgaggtcgtccagcggctg
accgaggcgcaccccgcccttgtcgtggtggacgaggcccagtgcgtgtcctcgtggggt
cacgacttccggcccgactacctgcgcctggcccaggcggtacggcggctgggccggccg
cccgtgctcgcgctcacggcgaccgccgcgccgccggtgcggcaggacatcgtcgaacgg
ctcggcatggagcggccgcgtcggctcgtcaccggattcgaccgtcccggcatcaggctg
gaggcgcaccgccacctggaggacgacgaacggcgctcccgcgtcctggaggacgccgcc
gccgcacccaagcccggcatcgtctacgcggcgacccgcaaggacagcgagtcctacgcc
gcggaactggcctccctcgggctcgccgccggcgcctaccacgcgggactgcgggccgcc
gaacgccggcggatccacgaggcgttcctctccggcgacctggacgtcgtggtggcgacc
tcggccttcgggatgggcatcgacaaggagaacgtgcggttcgtgctgcacgcgtcgctg
ccgggctcgctggacgcctactaccaggagatcgggcgctgcggccgcgacggacggccc
gccctcgccgtactgcactaccgcaccgaggacacgggcatgcaggcgtacttcagcagc
cgcacgccccgtccggaggccgtggacgcggtcgtacgggcggtccacgcccaccgcgac
gatccgccggacgtcaccggactgcgccgggagaccgacctgtcgcgcgcccgggtcacc
acggccgtcaacctgctggaggaagccggtgcgctggtcacggacgcctcgggcgccatc
cgtccggtcccgggcacggcgccgtcgcgcgcggtacggcgagccgtggacaccgccgag
gcccacaagcgcatggaccggtcgagggtggacatggcacgggcgtacgccgagacgacc
ggctgccggcggcgcttcctgctgggctacttcggcgaggagtacgaggccccctgcggc
aactgcgacatgtgcgacgagcaggagagcggcgacgacgacgcgacgagcaccggtcgg
catccggactccggcgcctatccgcccggagccgcggtacggcacggcgagtggggccgc
ggcaccgtgctgagcgaggacggggaccgcatcaccgtgctcttcgacgaggtcggctac
cgcaccctctccctggacgccctggccgcacgggacgacctgctcaccgtggtgggcggc
tcgcaggacagccgcccggagccctga
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