Streptomyces cyanogenus: S1361_32195
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Entry
S1361_32195 CDS
T07416
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
scyg
Streptomyces cyanogenus
Pathway
scyg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
S1361_32195 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyg03000
]
S1361_32195 (alkA)
03400 DNA repair and recombination proteins [BR:
scyg03400
]
S1361_32195 (alkA)
Enzymes [BR:
scyg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
S1361_32195 (alkA)
Transcription factors [BR:
scyg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
S1361_32195 (alkA)
DNA repair and recombination proteins [BR:
scyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
S1361_32195 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6117
DUF6233
Knl-2-like_dom
Motif
Other DBs
NCBI-ProteinID:
QTE02038
UniProt:
A0ABX7TZ22
LinkDB
All DBs
Position
7187497..7188963
Genome browser
AA seq
488 aa
AA seq
DB search
MHLDREHCVRAVHSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKPENMTFHPSAAACQQA
GFRACKRCRPDTSPGSPEWNRRADLVARAMRLIADGVVDREGVPGLAARLGYSTRQVERQ
LLAELGAGPLALARAQRAQTARLLVETSTLPMAEIAFAAGFSSIRSFNDTVREVFALSPS
ELRARAPRSGPGTPGVLTLRLPFRAPLHPSNLFGHLAATAVPGVEEWRDGAYRRTLRLPY
GHGIVALAPRPDHIACRLTLSDLRDLTVAITRCRRLLDLDADPVAVDERLRTDPLLAPLV
DRAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGKPLDDPEGGLTHLFPE
PEALAAVDPGTLAMPRTRRTTFTTLVRQLADGELHLGVEADWAEARARLLALPGFGPWTV
DVIAMRALGDPDAFLPTDLGIRRAAKELGLPSTPAALTARAAGWRPWRAYAVQYLWATDD
HPINFLPA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcgaccgggagcactgcgtgcgcgccgtgcactccaaggacgcacggttcgac
ggatggttcttcacggccgtcctgaccacccggatctactgccggccgagctgcccggtc
gtaccgcccaagccggagaacatgacgttccacccgagcgccgccgcctgccagcaggcc
ggcttccgggcctgcaagcgctgccggcccgacaccagccccggctccccggagtggaac
cggcgcgccgacctggtggcccgggccatgcggctgatcgccgacggggtcgtggaccgt
gagggcgtgcccggactcgccgcccggctcggttacagcacccggcaggtggagcggcag
ctgctcgccgagctgggcgccggccccctcgcgctcgcccgcgcccagcgcgcccagacc
gcgcggctgctcgtcgagaccagcacgctgcccatggcggagatcgccttcgcggccggc
ttctcctcgatccgctccttcaacgacaccgtccgcgaggtcttcgccctctccccgagc
gagctgcgcgcccgcgccccgaggagcggtccgggcacccccggcgtgctcaccctgcgg
ctgccgttccgcgccccgctgcacccgtccaacctcttcggccacctcgccgccaccgcc
gtacccggtgtcgaggagtggcgggacggcgcctaccgccgcacgctccgcctgccgtac
ggccacgggatcgtcgccctcgccccccgccccgaccacatcgcctgccgcctcaccctg
agcgacctgcgcgacctgaccgtggccatcacccgctgccgccgcctgctcgacctggac
gccgacccggtcgccgtcgacgagcggctgcgcaccgatccactgctcgccccgctggtc
gaccgggctcccgggcgccgggtgccgcgtacggtcgacgaggccgagttcgccgtgcgg
gccgtgctcgggcagcaggtgtccacggccgccgcccgcacccacgcggcccgtctggtc
accgcgcacggcaaacccctggacgaccccgaaggcggcctcacccacctcttcccggag
ccggaggcgctggccgccgtcgaccccgggaccctggcgatgccccgcacccggcgtacc
accttcaccaccctcgtccggcagctcgccgacggcgaactccacctgggcgtggaggcc
gactgggccgaggcgcgggcccggctgctcgcgctgcccggcttcgggccctggacggtg
gacgtcatcgccatgcgcgccctgggcgaccccgacgccttcctccccaccgacctcggc
atccggcgcgccgcgaaggaactcggcctgccgtccaccccggccgcgctgaccgcccgc
gcggccggctggcggccctggcgggcgtacgcggtgcagtacctgtgggcgaccgacgac
cacccgatcaacttcctgcccgcgtaa
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