Streptomyces cyanogenus: S1361_35105
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Entry
S1361_35105 CDS
T07416
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scyg
Streptomyces cyanogenus
Brite
KEGG Orthology (KO) [BR:
scyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scyg03032
]
S1361_35105
03400 DNA repair and recombination proteins [BR:
scyg03400
]
S1361_35105
Enzymes [BR:
scyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
S1361_35105
DNA replication proteins [BR:
scyg03032
]
Prokaryotic type
DNA Topoisomerases
S1361_35105
DNA repair and recombination proteins [BR:
scyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
S1361_35105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Hera_DD
Motif
Other DBs
NCBI-ProteinID:
QTE02613
LinkDB
All DBs
Position
7957656..7958681
Genome browser
AA seq
341 aa
AA seq
DB search
MRLRTSSCDGPGYTRIRCGRGFRYADATGEPLTDPEQLARIRALTVPPAWRDVWICPWPN
GHLQAVGTDDAGRRQYLYHEQFRAEQDKAKHEHVRQVARTLPELRARVALDLAGRGLSRD
RVTACAVRLLDLGFFRIGSDRHTRTSETYGLTTMLREHVDCGRGEITFSYPAKGGTAMVR
ALVDEQVHEVARALVRRPRGGDRFLVYWDRRAWHDLHGDDLNEALRRLSGTDVTAKDFRT
WHATVLAAVAVSVAARDARATDAARRRQITRAVREVSHYLGNTPAVWRSSYIDPKVFELF
EQGVTVAPALTRLGEHGEFGRPATQGAVEAAVLDLLDGAAG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcgcaccagctcgtgcgacggccccggctacacacgtatccgctgcggccgg
ggtttccgctatgccgacgccaccggcgagcccctcaccgaccccgagcagctcgcccgc
atccgggccctgaccgtcccgcccgcctggcgcgacgtgtggatctgcccgtggcccaac
ggccacctccaggccgtcggcaccgacgacgccgggcgccgccagtacctgtaccacgag
cagttccgcgccgagcaggacaaggccaagcacgagcacgtacggcaggtcgcgcggacc
ctgccggagctgcgcgccagggtggcgctcgacctggccggacgcgggctgagccgggac
cgggtcaccgcctgcgcggtccgcctgctcgacctgggcttcttccggatcggcagcgac
cggcacacccgcaccagcgagacctacggcctgacgaccatgctccgtgagcacgtcgac
tgcggccgcggcgagatcaccttcagctacccggccaagggcggcaccgcgatggtccgc
gccctcgtcgacgagcaggtccacgaggtcgcccgggccctggtgcgccgcccgcgcggt
ggcgaccgcttcctcgtctactgggaccgccgcgcctggcacgacctgcacggcgacgac
ctcaacgaggccctgcgccggctgtccggcaccgatgtcaccgccaaggacttccgcacc
tggcacgccaccgtgctggccgccgtggcggtctccgtggccgcgcgcgacgcccgggcg
accgatgccgcccggcgccggcagatcacccgggccgtccgcgaggtcagccactacctg
ggcaacacgcccgcggtgtggcggtcgtcgtacatcgacccgaaggtgttcgagctgttc
gagcagggtgtgaccgtggcccccgcgctcacccggctgggcgaacacggggagttcggg
cgtccggccacccagggggccgtcgaggctgccgtactggatcttctggacggagccgct
ggatga
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