KEGG   Streptomyces cynarae: N8I84_03775
Entry
N8I84_03775       CDS       T09435                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
scyn  Streptomyces cynarae
Brite
KEGG Orthology (KO) [BR:scyn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scyn03021]
    N8I84_03775
Transcription machinery [BR:scyn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     N8I84_03775
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 KORA HTH_23 HTH_Crp_2 MarR_2 HTH_37 HTH_3 MarR HTH_Tnp_4 Sigma70_ECF HTH_31 HTH_38
Other DBs
NCBI-ProteinID: UXY24394
UniProt: A0ABY6ECG0
LinkDB
Position
unmamed1:complement(776842..777663)
AA seq 273 aa
MDAHIAGLPQLADPSGVAPKDARALSKLFFDQLAVLEEGTPEYQYARNTLIEMNMSLVRF
AAARFRSRGPEEMEDIVQVGMIGLIKAIDRFELSREVEFTSFAIPYIVGEIKRFFRDTSW
AVHVPRRLQEARVQLARATEELRSRLGRAPTVKELSELMCLSEEEVIEARLAANGYNSSS
LDAAINNSEDGETALADFIGADDQALELVEDFQALAPMIAELGERDRQIIHLRFVEELTQ
AQIGERLGVSQMHVSRLLSRTLARLREGMLTTS
NT seq 822 nt   +upstreamnt  +downstreamnt
atggacgcgcacatagccggactgccgcagctcgccgacccgtccggggtcgcacccaag
gacgcccgtgcgttgtcgaagctgttctttgaccagttggcagtgctggaggagggtacg
cccgagtaccagtacgcgcgcaacacgctgatcgagatgaacatgtccctcgtccgcttc
gcggcggcccggttccgcagccgggggccggaggagatggaggacatcgtccaggtcggc
atgatcgggctgatcaaggcgatcgaccggttcgaactctcgcgggaggtggagttcacc
tccttcgccattccctacatcgtgggtgagatcaagcggttcttccgtgacacctcctgg
gcggtgcacgtgccgcggcgcctgcaggaggcccgggtccagctcgcacgggccaccgag
gagctccgcagccgcctgggccgcgctccgacggtcaaggagctgtcggagctgatgtgc
ctgtccgaggaggaggtcatcgaggcccgtctggcggccaacggctacaactcctcctcg
ctggacgccgccatcaacaacagcgaggacggtgagaccgcgctcgcggacttcatcggc
gccgacgaccaggcgctcgaactggtggaggacttccaggcgttggcccccatgatcgcc
gaactcggcgagcgggaccggcagatcattcacctgcggttcgtcgaggaactcacgcag
gcgcagatcggcgaacgcctcggcgtctcccagatgcacgtctcccgcctgctgtcccgc
acgctcgcccggctgcgcgaaggcatgctcaccaccagttga

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