Streptomyces cynarae: N8I84_10470
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Entry
N8I84_10470 CDS
T09435
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scyn
Streptomyces cynarae
Pathway
scyn00040
Pentose and glucuronate interconversions
scyn01100
Metabolic pathways
scyn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scyn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
N8I84_10470
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N8I84_10470
Enzymes [BR:
scyn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
N8I84_10470
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
UXY24477
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All DBs
Position
unmamed1:complement(2220072..2221343)
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AA seq
423 aa
AA seq
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MGCTALVLTVTGPAAHAAQPRDLGRRTLAAHDGWGSYGTGTTGGAAADAAHVYTVTTWDQ
FKAALADGGSAPKIVKVKGMIDADGPSCASFAVPGYDFDTYLKTYAPETWGRSKNLDGEP
DNSPEGLRRASAADQDAYIKANVPANTTIVGIGKDAGFKGASLQIKGVDNVIVRNLTFES
PLDCFPQWDPTDTADGNWNSEYDSAVVYGSTHVWMDHNTFTDGDHPDSTLPYYYGRIYEQ
HDGELDIVKGADYVTASWNVFADHDKTILIGNSDSASTAAVDRGHLKVTFHHNLFSNLVE
RAPRVRFGQVDSYNNHFVAGDGYSYSYGIGMESQLVAEHNAFTLPDGVKAGSILKKWKEA
PVTAADNYVNGTLTDLIAVHNAEIPGETLQSGADWTPTLRTKVDPARAVPGIVDHRAGAG
KVC
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atcggctgcaccgccctcgtcctgaccgtgaccggccccgccgcgcacgccgcccagccc
cgcgacctcggccgccggaccctcgccgcgcacgacggctggggctcctacggcaccggc
accaccggcggagcggccgccgacgccgcgcacgtctacaccgtcaccacctgggaccag
ttcaaggccgccctcgccgacggcggctccgcccccaagatcgtcaaggtgaagggcatg
atcgacgccgacgggccgagctgtgcgtccttcgcggtgcccggctacgacttcgacacc
tacctgaagacctacgcccccgagacgtggggccgcagcaagaacctggacggcgagccc
gacaacagccccgagggcctgcgccgcgcctccgccgccgaccaggacgcctacatcaag
gcgaacgtcccggccaacaccaccatcgtcggcatcggcaaggacgccggcttcaagggc
gcaagcctccagatcaagggcgtggacaacgtcatcgtccgcaacctgaccttcgagagc
cccctcgactgcttcccgcagtgggacccgaccgacaccgccgacggcaactggaactcc
gagtacgacagcgcggtcgtctacggctccacccacgtgtggatggaccacaacaccttc
accgacggcgaccacccggacagcacgctgccgtactactacggccggatctacgagcag
cacgacggcgagctcgacatcgtcaagggcgccgactacgtgaccgcctcctggaacgtc
ttcgccgaccacgacaagacgatcctcatcggcaacagcgacagcgcctccaccgccgcc
gtcgaccggggccacctgaaggtcaccttccaccacaacctgttctcgaacctggtcgag
cgcgccccgcgcgtccgcttcgggcaggtcgactcctacaacaaccacttcgtggcgggc
gacggctactcctacagctacggcatcggcatggagtcccagctcgtcgccgagcacaac
gcgttcacgctgcccgacggggtcaaggcaggctcgatcctgaagaagtggaaggaggcg
ccggtcaccgctgccgacaactacgtcaacggcacgctcaccgacctgatcgccgtgcac
aacgcggagatccccggcgagacgttgcagtcgggtgccgactggacgccgaccctgcgt
accaaggtcgacccggcccgggcggttccggggatcgtcgaccaccgcgcgggtgcggga
aaggtctgctga
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